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WormBase Tree Display for Gene: WBGene00032975

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Name Class

WBGene00032975SMapS_parentSequencecb25.fpc2852
IdentityVersion2
NameCGC_nameCbr-prg-1From_analysisInferred_from_orthology
Sequence_nameCBG11957
Molecular_nameCBG11957
CBG11957.1
CBP09000
Other_nameCBG_11957Accession_evidenceNDBHE601540
Public_nameCbr-prg-1
DB_infoDatabaseNDBlocus_tagCBG_11957
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:02WBPerson1971EventImportedInitial conversion from brigace
205 Nov 2007 17:16:12WBPerson2970Name_changeCGC_nameCbr-prg-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classprg
RNASeq_FPKMWBls:000000259.3768From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
64.1998From_analysisRNASeq.briggsae.WBls:0000002.control_mean
65.3224From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
67.9001From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
66.6113From_analysisRNASeq.briggsae.WBls:0000002.control_median
70.9614From_analysisRNASeq.briggsae.WBls:0000002.control_mean
91.2464From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000311.6944From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
15.3464From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
18.9985From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
14.5679From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
15.0869From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000047.83876From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
8.24549From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
8.65222From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
5.87015From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
6.21826From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
7.24538From_analysisRNASeq.briggsae.WBls:0000004.control_mean
7.6475From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:000002711.0209From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.45907From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
5.0327From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
5.83756From_analysisRNASeq.briggsae.WBls:0000027.control_mean
15.0876From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
8.0268From_analysisRNASeq.briggsae.WBls:0000027.control_median
8.15007From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003517.5162From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003817.2697From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
34.4827From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
48.5071From_analysisRNASeq.briggsae.WBls:0000038.control_mean
50.0448From_analysisRNASeq.briggsae.WBls:0000038.control_median
65.607From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
76.669From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:0000041150.318From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
151.242From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
151.289From_analysisRNASeq.briggsae.WBls:0000041.control_median
151.336From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
153.085From_analysisRNASeq.briggsae.WBls:0000041.control_mean
159.445From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
153.202From_analysisRNASeq.briggsae.WBls:0000041.control_median
154.522From_analysisRNASeq.briggsae.WBls:0000041.control_mean
155.067From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
159.723From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:0000063122.963From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
123.061From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
132.927From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
142.835From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
143.29From_analysisRNASeq.briggsae.WBls:0000063.control_mean
194.663From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
123.994From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
128.46From_analysisRNASeq.briggsae.WBls:0000063.control_median
140.074From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010134.4827From_analysisRNASeq.briggsae.total_over_all_stages.control_median
62.7613From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
26.7406From_analysisRNASeq.briggsae.total_over_all_stages.control_median
63.1447From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00136302
00136303
Ortholog (45)
Structured_descriptionAutomated_descriptionPredicted to enable RNA binding activity. Is an ortholog of C. elegans prg-1. In C. elegans, prg-1 is involved in 21U-RNA metabolic process; gamete generation; and positive regulation of mitotic nuclear division.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG11957
Corresponding_transcriptCBG11957.1
Other_sequence (34)
Experimental_infoExpr_patternExpr1054450
Microarray_resultsGPL8303_CB6_WBGene00032975_A
GPL8303_CB6_WBGene00032975_B
GPL14143_CBG11957_1804-1863_0.917_10_C
GPL14143_CBG11957_1973-2032_0.918_9_B
GPL14143_CBG11957_2379-2438_0.825_105_A
Expression_clusterWBPaper00059178:Cbr-htz-1(gu167)_upregulated
WBPaper00059178:Cbr-spr-4(gu163)_upregulated
MethodGene