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WormBase Tree Display for Gene: WBGene00032156

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Name Class

WBGene00032156SMapS_parentSequencecb25.fpc2397
IdentityVersion2
NameCGC_nameCbr-rig-3From_analysisInferred_from_orthology
Sequence_nameCBG10909
Molecular_nameCBG10909
CBG10909.1
CBP02658
Other_nameCBG_10909Accession_evidenceNDBHE601482
Public_nameCbr-rig-3
DB_infoDatabaseNDBlocus_tagCBG_10909
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:01WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-rig-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrig
RNASeq_FPKMWBls:000000211.5545From_analysisRNASeq.briggsae.WBls:0000002.control_mean
15.1439From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
15.6827From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
3.83703From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
10.0342From_analysisRNASeq.briggsae.WBls:0000002.control_median
4.92445From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
9.89702From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000031.11387From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
3.40821From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
5.70255From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
4.30043From_analysisRNASeq.briggsae.WBls:0000003.control_mean
6.08487From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000426.5641From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
29.5068From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
32.4496From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
27.8021From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
31.1324From_analysisRNASeq.briggsae.WBls:0000004.control_mean
31.9351From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
36.9111From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.981844From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
15.5641From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
5.44564From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
7.33053From_analysisRNASeq.briggsae.WBls:0000027.control_mean
10.5049From_analysisRNASeq.briggsae.WBls:0000027.control_median
11.8828From_analysisRNASeq.briggsae.WBls:0000027.control_mean
25.5398From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003530.1289From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003815.6554From_analysisRNASeq.briggsae.WBls:0000038.control_median
16.0045From_analysisRNASeq.briggsae.WBls:0000038.control_mean
24.7925From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
26.7848From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
5.92235From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
6.51821From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004110.5181From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
3.08377From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
3.71431From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
3.94213From_analysisRNASeq.briggsae.WBls:0000041.control_median
4.16994From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
5.37153From_analysisRNASeq.briggsae.WBls:0000041.control_mean
6.18048From_analysisRNASeq.briggsae.WBls:0000041.control_median
6.36596From_analysisRNASeq.briggsae.WBls:0000041.control_mean
8.19101From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
8.51861From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.33665From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
2.36018From_analysisRNASeq.briggsae.WBls:0000063.control_mean
2.66353From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
2.8206From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
3.98013From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
2.74206From_analysisRNASeq.briggsae.WBls:0000063.control_median
3.23715From_analysisRNASeq.briggsae.WBls:0000063.control_mean
7.62199From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010113.2807From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
5.92235From_analysisRNASeq.briggsae.total_over_all_stages.control_median
14.2808From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
7.9065From_analysisRNASeq.briggsae.total_over_all_stages.control_median
Ortholog (31)
Paralog (18)
Structured_descriptionAutomated_descriptionPredicted to be involved in axon guidance and cell adhesion. Predicted to be located in plasma membrane. Is an ortholog of C. elegans rig-3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG10909
Corresponding_CDS_historyCBG10909:bp194
CBG10909:bp255
Corresponding_transcriptCBG10909.1
Other_sequenceCR01608
CRC00380_1
Experimental_infoExpr_patternExpr1067912
Microarray_resultsGPL8303_CB6_WBGene00032156_A
GPL8303_CB6_WBGene00032156_B
GPL14143_CBG10909_658-717_0.788_9_C
GPL14143_CBG10909_1203-1262_0.709_83_B
GPL14143_CBG10909_1419-1478_0.767_34_A
MethodGene