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WormBase Tree Display for Gene: WBGene00032116

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Name Class

WBGene00032116SMapS_parentSequencecb25.fpc2397
IdentityVersion2
NameCGC_nameCbr-clec-266From_analysisInferred_from_orthology
Sequence_nameCBG10851
Molecular_nameCBG10851
CBG10851.1
CBP47139
Other_nameCBG_10851Accession_evidenceNDBHE601482
Public_nameCbr-clec-266
DB_infoDatabaseNDBlocus_tagCBG_10851
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:01WBPerson1971EventImportedInitial conversion from brigace
221 Apr 2008 17:10:49WBPerson2970Name_changeCGC_nameCbr-clec-266
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classclec
RNASeq_FPKMWBls:000000210.2216From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
5.37702From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
8.16301From_analysisRNASeq.briggsae.WBls:0000002.control_mean
8.8904From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
11.1936From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
8.92066From_analysisRNASeq.briggsae.WBls:0000002.control_mean
9.556From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:0000003338.979From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
451.174From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
563.369From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
384.778From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
429.042From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000041109.93From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
1155.88From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
1201.82From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
1079.38From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
1109.61From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
1159.5From_analysisRNASeq.briggsae.WBls:0000004.control_mean
1296.74From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.194088From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.844196From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
2.3385From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0.300617From_analysisRNASeq.briggsae.WBls:0000027.control_median
0.407146From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
0.734933From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000350.852563From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.375711From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
0.447406From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
0.507699From_analysisRNASeq.briggsae.WBls:0000038.control_median
0.567993From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
0.896177From_analysisRNASeq.briggsae.WBls:0000038.control_mean
2.1936From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004110.1127From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
11.4137From_analysisRNASeq.briggsae.WBls:0000041.control_mean
12.9443From_analysisRNASeq.briggsae.WBls:0000041.control_median
15.7758From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
16.6599From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
3.10658From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
11.6626From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
11.7176From_analysisRNASeq.briggsae.WBls:0000041.control_mean
12.3252From_analysisRNASeq.briggsae.WBls:0000041.control_median
12.9879From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.096229From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.481146From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.157666From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.464849From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:0000101114.055From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
2.3385From_analysisRNASeq.briggsae.total_over_all_stages.control_median
189.864From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
4.19202From_analysisRNASeq.briggsae.total_over_all_stages.control_median
Ortholog (21)
ParalogWBGene00026232Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032401Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032406Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032407Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033397Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036528Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; Lectin C-type domain; C-type lectin-like; and C-type lectin fold. Is an ortholog of C. elegans clec-266.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG10851
Corresponding_CDS_historyCBG10851:bp194
CBG10851:bp255
Corresponding_transcriptCBG10851.1
Other_sequenceCRC05725_1
Experimental_infoExpr_patternExpr1050278
Microarray_resultsGPL8303_CB6_WBGene00032116_A
GPL8303_CB6_WBGene00032116_B
GPL14143_CBG10851_190-249_0.895_2_A
Expression_clusterWBPaper00058955:heatshock_upregulated_CBG
MethodGene