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WormBase Tree Display for Gene: WBGene00030996

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Name Class

WBGene00030996SMapS_parentSequencecb25.fpc2220a
IdentityVersion2
NameCGC_nameCbr-zip-5From_analysisInferred_from_orthology
Sequence_nameCBG09406
Molecular_nameCBG09406a
CBG09406a.1
CBP08212
CBG09406b
CBP47589
CBG09406b.1
Other_nameCBG_09406Accession_evidenceNDBHE600954
Public_nameCbr-zip-5
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:00WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-zip-5
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classzip
RNASeq_FPKMWBls:00000022.39776From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
4.43193From_analysisRNASeq.briggsae.WBls:0000002.control_mean
5.01201From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
5.88602From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
5.38506From_analysisRNASeq.briggsae.WBls:0000002.control_mean
5.44902From_analysisRNASeq.briggsae.WBls:0000002.control_median
8.24445From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000030.252762From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.505523From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.262943From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0.283306From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.535326From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0.712102From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.888878From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
0.763639From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0.880164From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.954177From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
1.2588From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000270.867251From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
12.4325From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.44511From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
5.58162From_analysisRNASeq.briggsae.WBls:0000027.control_mean
12.6685From_analysisRNASeq.briggsae.WBls:0000027.control_mean
33.929From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
7.93881From_analysisRNASeq.briggsae.WBls:0000027.control_median
WBls:000003534.7912From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.716326From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
121.866From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
37.4193From_analysisRNASeq.briggsae.WBls:0000038.control_median
49.3552From_analysisRNASeq.briggsae.WBls:0000038.control_mean
67.5568From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
7.28178From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004113.7049From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
3.80772From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
4.37114From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
4.56769From_analysisRNASeq.briggsae.WBls:0000041.control_median
4.76424From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
6.662From_analysisRNASeq.briggsae.WBls:0000041.control_mean
15.2214From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
6.84149From_analysisRNASeq.briggsae.WBls:0000041.control_median
8.46469From_analysisRNASeq.briggsae.WBls:0000041.control_mean
8.91874From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.824965From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.987761From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
1.19973From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.37742From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.80852From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
1.18259From_analysisRNASeq.briggsae.WBls:0000063.control_median
1.44438From_analysisRNASeq.briggsae.WBls:0000063.control_mean
2.66761From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010112.1468From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
3.80772From_analysisRNASeq.briggsae.total_over_all_stages.control_median
11.171From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
3.62642From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00134452
00134453
Ortholog (18)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans zip-5.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG09406a
CBG09406b
Corresponding_transcriptCBG09406a.1
CBG09406b.1
Other_sequenceCRC03078_1
CR11428
CBC08146_1
Experimental_infoExpr_patternExpr1056909
Microarray_resultsGPL8303_CB6_WBGene00030996_A
GPL8303_CB6_WBGene00030996_B
GPL14143_CBG09406_270-329_0.931_2_C
GPL14143_CBG09406_365-424_0.872_21_A
GPL14143_CBG09406_486-545_0.934_1_B
Expression_clusterWBPaper00051137:Santeuil-virus_upregulated_JU1264
WBPaper00058955:heatshock_upregulated_CBG
MethodGene