WormBase Tree Display for Gene: WBGene00030343

WBGene00030343 SMap: S_parent: Sequence: cb25.fpc2051
  Identity: Version: 2
    Name: CGC_name: Cbr-papl-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBG08581
      Molecular_name: CBG08581
        CBG08581.1
        CBP27447
      Other_name: CBG_08581 Accession_evidence: NDB HE601197
      Public_name: Cbr-papl-1
    DB_info: Database: NDB locus_tag CBG_08581
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:59 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 29 Apr 2015 12:22:06 WBPerson2970 Name_change: CGC_name: Cbr-papl-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: papl
    RNASeq_FPKM: WBls:0000002 13.6002 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        14.2775 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        19.2009 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        7.3221 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        10.7998 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        11.9559 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        7.02321 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 0.108851 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
        0.3447 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        0.58055 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        0.2298 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 1.18762 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        1.3798 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        1.57199 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        2.05322 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        2.14928 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        2.46298 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        2.89425 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 0.090539 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        14.6676 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        1.82724 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        5.52846 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        14.7686 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
        7.83849 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        8.24742 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
      WBls:0000035 21.0262 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 14.6962 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        16.4523 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        18.3832 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        22.0701 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        24.1887 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        4.85428 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
      WBls:0000041 10.6144 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        11.3217 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        11.5059 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        11.6901 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        11.9114 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        14.0195 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        11.0897 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        12.0934 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        13.8251 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 11.4598 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        7.66899 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        8.80757 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        8.96706 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        9.11051 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        11.6904 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        8.33922 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        9.03878 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
      WBls:0000101 10.6144 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        9.6521 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        9.10038 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        9.86246 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
    GO_annotation: 00133735
      00133736
      00133737
    Ortholog (29)
    Paralog: WBGene00023747 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00023748 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00037980 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00037993 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00088166 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable acid phosphatase activity and metal ion binding activity. Is an ortholog of C. elegans papl-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG08581
    Corresponding_CDS_history: CBG08581:bp194
    Corresponding_transcript: CBG08581.1
    Other_sequence (20)
  Experimental_info: Expr_pattern: Expr1067396
    Microarray_results: GPL8303_CB6_WBGene00030343_A
      GPL8303_CB6_WBGene00030343_B
      GPL14143_CBG08581_567-626_0.888_23_C
      GPL14143_CBG08581_682-741_0.914_12_B
      GPL14143_CBG08581_812-871_0.870_41_A
  Method: Gene