Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00030079

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00030079SMapS_parentSequencecb25.fpc1417
IdentityVersion2
NameCGC_nameCbr-nmy-2From_analysisInferred_from_orthology
Sequence_nameCBG08250
Molecular_nameCBG08250
CBG08250.1
CBP02011
Other_nameCBG_08250Accession_evidenceNDBHE601064
Public_nameCbr-nmy-2
DB_infoDatabaseNDBlocus_tagCBG_08250
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:59WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-nmy-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnmy
AlleleWBVar00113257
WBVar00113258
WBVar00113259
WBVar00113260
WBVar00113261
WBVar00113256
WBVar00020089
RNASeq_FPKMWBls:000000222.7171From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
42.5977From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
50.3528From_analysisRNASeq.briggsae.WBls:0000002.control_mean
85.7435From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
46.1046From_analysisRNASeq.briggsae.WBls:0000002.control_median
49.6116From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
50.1675From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000346.2209From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
60.8414From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
75.462From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
43.0176From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
54.9002From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000425.9072From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
27.0489From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
28.1906From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
25.7742From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
27.9153From_analysisRNASeq.briggsae.WBls:0000004.control_mean
29.17From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
30.5347From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002711.3467From_analysisRNASeq.briggsae.WBls:0000027.control_mean
23.7979From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.39838From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
7.84386From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
15.2432From_analysisRNASeq.briggsae.WBls:0000027.control_mean
15.8209From_analysisRNASeq.briggsae.WBls:0000027.control_median
26.9325From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003520.3214From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003822.4875From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
24.535From_analysisRNASeq.briggsae.WBls:0000038.control_mean
26.0702From_analysisRNASeq.briggsae.WBls:0000038.control_median
29.6528From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
36.3916From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
9.60827From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:0000041118.531From_analysisRNASeq.briggsae.WBls:0000041.control_mean
123.26From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
130.629From_analysisRNASeq.briggsae.WBls:0000041.control_median
137.998From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
142.563From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
70.3022From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
106.544From_analysisRNASeq.briggsae.WBls:0000041.control_mean
106.885From_analysisRNASeq.briggsae.WBls:0000041.control_median
74.6285From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
90.5097From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006355.2521From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
56.2261From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
60.0982From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
60.2881From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
65.6061From_analysisRNASeq.briggsae.WBls:0000063.control_mean
96.166From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
49.4666From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
58.1622From_analysisRNASeq.briggsae.WBls:0000063.control_median
62.9162From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010135.4318From_analysisRNASeq.briggsae.total_over_all_stages.control_median
47.4738From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
35.9117From_analysisRNASeq.briggsae.total_over_all_stages.control_median
47.2733From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00133485
00133486
00133487
00133488
Ortholog (37)
Paralog (22)
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity; actin filament binding activity; and cytoskeletal motor activity. Predicted to be part of myosin complex. Is an ortholog of C. elegans nmy-2. In C. elegans, nmy-2 is involved in several processes, including asymmetric protein localization involved in cell fate determination; cell division; and regulation of anatomical structure morphogenesis.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG08250
Corresponding_CDS_historyCBG08250:bp194
CBG08250:bp265
Corresponding_transcriptCBG08250.1
Other_sequence (20)
Experimental_infoExpr_patternExpr1057878
Microarray_resultsGPL8303_CB6_WBGene00030079_A
GPL14143_CBG08250_421-480_0.778_268_B
GPL14143_CBG08250_462-521_0.810_140_A
GPL14143_CBG08250_5778-5837_0.899_20_C
Expression_clusterWBPaper00059178:Cbr-spr-4(gu163)_upregulated
MethodGene