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WormBase Tree Display for Gene: WBGene00030017

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Name Class

WBGene00030017SMapS_parentSequencecb25.fpc1402c
IdentityVersion2
NameCGC_nameCbr-dve-1From_analysisInferred_from_orthology
Sequence_nameCBG08165
Molecular_nameCBG08165
CBG08165.1
CBP48236
Other_nameCBG_08165Accession_evidenceNDBHE600971
Public_nameCbr-dve-1
DB_infoDatabaseNDBlocus_tagCBG_08165
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:59WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-dve-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdve
RNASeq_FPKMWBls:000000211.8302From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
12.8215From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
20.2704From_analysisRNASeq.briggsae.WBls:0000002.control_mean
36.1595From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
12.3258From_analysisRNASeq.briggsae.WBls:0000002.control_median
17.5332From_analysisRNASeq.briggsae.WBls:0000002.control_mean
9.32168From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000314.3195From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
15.1571From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
15.9946From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
15.2778From_analysisRNASeq.briggsae.WBls:0000003.control_mean
15.5194From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000453.8363From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
56.375From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
58.9138From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
50.046From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
53.2741From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
54.2241From_analysisRNASeq.briggsae.WBls:0000004.control_mean
55.0502From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002720.0709From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.07738From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
51.6875From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
6.4477From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
23.3332From_analysisRNASeq.briggsae.WBls:0000027.control_median
25.1078From_analysisRNASeq.briggsae.WBls:0000027.control_mean
40.2186From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003511.4526From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003814.5853From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
18.2191From_analysisRNASeq.briggsae.WBls:0000038.control_median
18.9877From_analysisRNASeq.briggsae.WBls:0000038.control_mean
21.8529From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
35.6639From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
3.84863From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:00000414.42383From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
5.63341From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
5.63587From_analysisRNASeq.briggsae.WBls:0000041.control_median
5.63833From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
5.75149From_analysisRNASeq.briggsae.WBls:0000041.control_mean
7.31039From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
5.42972From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
5.93776From_analysisRNASeq.briggsae.WBls:0000041.control_mean
7.19087From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
5.82648From_analysisRNASeq.briggsae.WBls:0000063.control_mean
6.90109From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
7.07795From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
7.42543From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
7.72795From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
5.70035From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
5.80546From_analysisRNASeq.briggsae.WBls:0000063.control_mean
6.98952From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010111.8302From_analysisRNASeq.briggsae.total_over_all_stages.control_median
16.716From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
12.3258From_analysisRNASeq.briggsae.total_over_all_stages.control_median
19.1188From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00133435
00133436
Ortholog (30)
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity. Predicted to be involved in chromatin remodeling. Is an ortholog of C. elegans dve-1. In C. elegans, dve-1 is involved in embryo development; mitochondrial unfolded protein response; and regulation of innate immune response.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG08165
Corresponding_CDS_historyCBG08165:bp194
CBG08165:bp259
Corresponding_transcriptCBG08165.1
Other_sequence (14)
Experimental_infoExpr_patternExpr1064685
Microarray_resultsGPL14143_CBG08165_481-540_0.810_1_C
GPL14143_CBG08165_546-605_0.786_21_B
GPL14143_CBG08165_1256-1315_0.792_16_A
MethodGene