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WormBase Tree Display for Gene: WBGene00029985

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Name Class

WBGene00029985SMapS_parentSequencecb25.fpc1402c
IdentityVersion2
NameCGC_nameCbr-ncam-1From_analysisInferred_from_orthology
Sequence_nameCBG08127
Molecular_nameCBG08127
CBG08127.1
CBP40042
CBG08127.2
Other_nameCBG_08127Accession_evidenceNDBHE600971
Public_nameCbr-ncam-1
DB_infoDatabaseNDBlocus_tagCBG_08127
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:59WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-ncam-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classncam
AlleleWBVar00013439
WBVar00013444
WBVar00009802
RNASeq_FPKMWBls:000000211.5976From_analysisRNASeq.briggsae.WBls:0000002.control_mean
16.0976From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
16.957From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
1.73804From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
2.13985From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
9.11872From_analysisRNASeq.briggsae.WBls:0000002.control_median
9.23312From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000310.0499From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
10.5967From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
9.50301From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
8.99165From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
9.69712From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000458.2089From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
61.5688From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
64.9287From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
59.9935From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
60.3012From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
61.3835From_analysisRNASeq.briggsae.WBls:0000004.control_mean
63.4852From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.793352From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
14.4714From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.97414From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
5.7463From_analysisRNASeq.briggsae.WBls:0000027.control_mean
11.8956From_analysisRNASeq.briggsae.WBls:0000027.control_mean
30.3436From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
8.22277From_analysisRNASeq.briggsae.WBls:0000027.control_median
WBls:000003524.2434From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003817.3683From_analysisRNASeq.briggsae.WBls:0000038.control_mean
17.6698From_analysisRNASeq.briggsae.WBls:0000038.control_median
27.7949From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
30.8114From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
3.32233From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
7.5446From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000412.273From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
2.83184From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
2.97204From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.11225From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
3.86056From_analysisRNASeq.briggsae.WBls:0000041.control_mean
7.22517From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
3.98142From_analysisRNASeq.briggsae.WBls:0000041.control_median
4.35848From_analysisRNASeq.briggsae.WBls:0000041.control_mean
4.85059From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
5.858From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000631.83523From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.02334From_analysisRNASeq.briggsae.WBls:0000063.control_mean
2.08237From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
2.80854From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
3.39058From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
2.44546From_analysisRNASeq.briggsae.WBls:0000063.control_median
2.96859From_analysisRNASeq.briggsae.WBls:0000063.control_mean
7.69484From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010115.0087From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
7.5446From_analysisRNASeq.briggsae.total_over_all_stages.control_median
17.8661From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
8.34324From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00133399
00133400
Ortholog (29)
Paralog (18)
Structured_descriptionAutomated_descriptionPredicted to be involved in axon guidance and cell adhesion. Predicted to be located in plasma membrane. Is an ortholog of C. elegans ncam-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG08127
Corresponding_CDS_historyCBG08127:bp194
CBG08127:bp255
Corresponding_transcriptCBG08127.1
CBG08127.2
Other_sequence (23)
Experimental_infoExpr_patternExpr1062858
Microarray_resultsGPL8303_CB6_WBGene00029985_A
GPL8303_CB6_WBGene00029985_B
GPL14143_CBG08127_1811-1870_0.740_148_C
GPL14143_CBG08127_2110-2169_0.795_22_A
GPL14143_CBG08127_2156-2215_0.786_50_B
MethodGene