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WormBase Tree Display for Gene: WBGene00029583

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Name Class

WBGene00029583SMapS_parentSequencecb25.fpc0829
IdentityVersion2
NameCGC_nameCbr-unc-3From_analysisInferred_from_orthology
Sequence_nameCBG07590
Molecular_nameCBG07590a
CBG07590a.1
CBP33933
CBG07590b
CBP43943
CBG07590b.1
Other_nameCBG_07590Accession_evidenceNDBHE601041
Public_nameCbr-unc-3
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:59WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-unc-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
AlleleWBVar00008347
RNASeq_FPKMWBls:00000023.03418From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
3.2043From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
4.10082From_analysisRNASeq.briggsae.WBls:0000002.control_mean
6.06399From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
3.0509From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
3.1276From_analysisRNASeq.briggsae.WBls:0000002.control_median
3.83834From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.844502From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
1.18933From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.53415From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0.293477From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
0.89071From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000412.8824From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
14.0654From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
15.2484From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
13.7786From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
14.2636From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
14.3027From_analysisRNASeq.briggsae.WBls:0000004.control_mean
15.3407From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.883355From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
15.1705From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.84998From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
6.30128From_analysisRNASeq.briggsae.WBls:0000027.control_mean
15.3764From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
8.57006From_analysisRNASeq.briggsae.WBls:0000027.control_mean
9.01024From_analysisRNASeq.briggsae.WBls:0000027.control_median
WBls:00000355.30985From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.290303From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
1.7344From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
1.99682From_analysisRNASeq.briggsae.WBls:0000038.control_median
2.25924From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
2.36191From_analysisRNASeq.briggsae.WBls:0000038.control_mean
5.16368From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.123227From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.207429From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.243716From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.280003From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.298225From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.582241From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.431122From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.438578From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.590009From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
0.848559From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.077712From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.1691From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.767787From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.038856From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.215974From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.450348From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001011.7344From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.53209From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
1.99682From_analysisRNASeq.briggsae.total_over_all_stages.control_median
4.37956From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00132959
00132960
00132961
OrthologWBGene00006743Caenorhabditis elegansFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00110071Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00058555Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00151995Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00119650Caenorhabditis japonicaFrom_analysisOMA
Inparanoid_8
WormBase-Compara
CBOVI.g2839Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g15800Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g16856Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP29.g23179Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g25081Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g9744Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g18768Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g16929Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g8761Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00272.g8258Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-3Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g10038Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00144.g5548Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_01698Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_025639Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g07560Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g2071Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0141800Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00226557Brugia malayiFrom_analysisWormBase-Compara
chrX_pilon.g20643Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00240610Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00265590Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00291761Trichuris murisFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity and protein dimerization activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans unc-3. In C. elegans, unc-3 is involved in several processes, including dauer larval development; neuron differentiation; and positive regulation of transcription by RNA polymerase II.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG07590a
CBG07590b
Corresponding_CDS_historyCBG07590:bp194
Corresponding_transcriptCBG07590a.1
CBG07590b.1
Other_sequence (18)
Experimental_infoExpr_patternExpr1064578
Microarray_resultsGPL8303_CB6_WBGene00029583_A
GPL8303_CB6_WBGene00029583_B
GPL14143_CBG07590_715-774_0.793_18_C
GPL14143_CBG07590_1030-1089_0.814_3_B
GPL14143_CBG07590_1167-1226_0.805_6_A
MethodGene