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WormBase Tree Display for Gene: WBGene00029059

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Name Class

WBGene00029059SMapS_parentSequencecb25.fpc0201
IdentityVersion2
NameCGC_nameCbr-rab-6.1From_analysisInferred_from_orthology
Sequence_nameCBG06854
Molecular_nameCBG06854
CBG06854.1
CBP01751
Other_nameCBG_06854Accession_evidenceNDBHE601347
Public_nameCbr-rab-6.1
DB_infoDatabaseNDBlocus_tagCBG_06854
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:58WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-rab-6.1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrab
RNASeq_FPKMWBls:000000244.6008From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
47.9858From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
54.9163From_analysisRNASeq.briggsae.WBls:0000002.control_mean
72.1622From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
58.6839From_analysisRNASeq.briggsae.WBls:0000002.control_mean
58.9863From_analysisRNASeq.briggsae.WBls:0000002.control_median
69.9867From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000346.4337From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
52.9967From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
59.5598From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
50.0039From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
51.9991From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000432.4321From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
32.7245From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
33.0169From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
29.9769From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
35.3938From_analysisRNASeq.briggsae.WBls:0000004.control_mean
39.247From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
42.2961From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002712.0561From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
19.0173From_analysisRNASeq.briggsae.WBls:0000027.control_mean
39.9858From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
5.01002From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
17.2087From_analysisRNASeq.briggsae.WBls:0000027.control_median
19.8533From_analysisRNASeq.briggsae.WBls:0000027.control_mean
22.3614From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003524.5344From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003827.9532From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
31.9384From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
33.2799From_analysisRNASeq.briggsae.WBls:0000038.control_median
34.6214From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
35.7702From_analysisRNASeq.briggsae.WBls:0000038.control_mean
48.5677From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004170.9065From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
71.6466From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
73.1279From_analysisRNASeq.briggsae.WBls:0000041.control_median
74.6091From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
78.6634From_analysisRNASeq.briggsae.WBls:0000041.control_mean
97.4915From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
103.176From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
83.5314From_analysisRNASeq.briggsae.WBls:0000041.control_median
85.0472From_analysisRNASeq.briggsae.WBls:0000041.control_mean
92.4538From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:0000063114.034From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
53.9189From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
54.0947From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
59.4441From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
61.1614From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
68.5306From_analysisRNASeq.briggsae.WBls:0000063.control_mean
59.2933From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
59.3687From_analysisRNASeq.briggsae.WBls:0000063.control_median
66.9911From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010144.6008From_analysisRNASeq.briggsae.total_over_all_stages.control_median
45.2511From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
45.5173From_analysisRNASeq.briggsae.total_over_all_stages.control_median
47.9231From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00132517
00132518
Ortholog (32)
Paralog (31)
Structured_descriptionAutomated_descriptionPredicted to enable GTP binding activity and GTPase activity. Is an ortholog of C. elegans rab-6.1. In C. elegans, rab-6.1 is involved in cortical granule exocytosis and cuticle development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG06854
Corresponding_CDS_historyCBG06854:bp194
Corresponding_transcriptCBG06854.1
Other_sequencePPC09003_1
Oden_isotig15173
PPC17073_1
Oden_isotig15172
CBC04025_1
Experimental_infoExpr_patternExpr1064735
Microarray_resultsGPL8303_CB6_WBGene00029059_A
GPL8303_CB6_WBGene00029059_B
GPL8303_CB6_WBGene00029059_C
GPL14143_CBG06854_569-628_0.954_1_A
MethodGene