Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00028693

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00028693SMapS_parentSequencecb25.fpc0156
IdentityVersion1
NameSequence_nameCBG06414
Molecular_nameCBG06414
CBG06414.1
CBP07464
Other_nameCBG_06414Accession_evidenceNDBHE601320
Public_nameCBG06414
DB_infoDatabaseNDBlocus_tagCBG_06414
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:58WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar00111451
WBVar00005219
WBVar00005224
WBVar00111449
WBVar00111450
WBVar00005229
RNASeq_FPKMWBls:0000002137.861From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
50.3126From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
58.9081From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
82.3606From_analysisRNASeq.briggsae.WBls:0000002.control_mean
112.38From_analysisRNASeq.briggsae.WBls:0000002.control_mean
202.439From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
98.3846From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.79562From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.59124From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.41008From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
0.667107From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000041.23767From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
1.65777From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
2.07787From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0.899212From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
1.19862From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
1.27745From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
1.33816From_analysisRNASeq.briggsae.WBls:0000004.control_mean
WBls:0000024 (12)
WBls:000002713.0944From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
207.493From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
50.4458From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
90.3444From_analysisRNASeq.briggsae.WBls:0000027.control_mean
57.9641From_analysisRNASeq.briggsae.WBls:0000027.control_median
65.4825From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
84.1289From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003528.3377From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038101.938From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
118.97From_analysisRNASeq.briggsae.WBls:0000038.control_median
136.003From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
161.908From_analysisRNASeq.briggsae.WBls:0000038.control_mean
349.634From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
60.055From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004117.1264From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
17.3625From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
19.8106From_analysisRNASeq.briggsae.WBls:0000041.control_median
22.2588From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
22.4025From_analysisRNASeq.briggsae.WBls:0000041.control_mean
32.8623From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
19.4047From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
20.8318From_analysisRNASeq.briggsae.WBls:0000041.control_median
27.9639From_analysisRNASeq.briggsae.WBls:0000041.control_mean
58.7684From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:0000063109.179From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
112.268From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
113.325From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
86.2927From_analysisRNASeq.briggsae.WBls:0000063.control_mean
96.6914From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
102.935From_analysisRNASeq.briggsae.WBls:0000063.control_median
10.568From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
73.6719From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010150.3126From_analysisRNASeq.briggsae.total_over_all_stages.control_median
72.3348From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
47.3676From_analysisRNASeq.briggsae.total_over_all_stages.control_median
64.6884From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Contained_in_operonCBOPA0205
Ortholog (31)
Paralog (21)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domain: CUB-like domain. Is an ortholog of C. elegans K08D8.5. In C. elegans, K08D8.5 is involved in innate immune response and response to gamma radiation.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG06414
Corresponding_CDS_historyCBG06414:bp194
Corresponding_transcriptCBG06414.1
Experimental_infoExpr_patternExpr1057873
Microarray_resultsGPL8303_CB6_WBGene00028693_A
GPL14143_CBG06414_1097-1156_0.928_1_A
MethodGene