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WormBase Tree Display for Gene: WBGene00027868

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Name Class

WBGene00027868SMapS_parentSequencecb25.fpc0110
IdentityVersion2
NameCGC_nameCbr-best-9From_analysisInferred_from_orthology
Sequence_nameCBG05414
Molecular_nameCBG05414
CBG05414.1
CBP15363
Other_nameCBG_05414Accession_evidenceNDBHE601369
Public_nameCbr-best-9
DB_infoDatabaseNDBlocus_tagCBG_05414
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:57WBPerson1971EventImportedInitial conversion from brigace
207 Feb 2012 16:36:56WBPerson2970Name_changeCGC_nameCbr-best-9
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classbest
RNASeq_FPKMWBls:00000021.25045From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
2.57055From_analysisRNASeq.briggsae.WBls:0000002.control_mean
2.87754From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
3.58367From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
0.863377From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
2.06399From_analysisRNASeq.briggsae.WBls:0000002.control_median
2.14376From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.116668From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
0.258869From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.401071From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0.17258From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.99157From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
1.17075From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
1.34993From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
1.50767From_analysisRNASeq.briggsae.WBls:0000004.control_mean
1.62671From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
1.76885From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
1.80128From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.097328From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.231017From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.983371From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.62177From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.22608From_analysisRNASeq.briggsae.WBls:0000027.control_median
1.29282From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.22115From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000351.79278From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.596196From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
1.52838From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
1.81262From_analysisRNASeq.briggsae.WBls:0000038.control_median
2.09686From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
2.25609From_analysisRNASeq.briggsae.WBls:0000038.control_mean
4.80294From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000410.473967From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.657506From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.669156From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.680807From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
22.5247From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
6.08425From_analysisRNASeq.briggsae.WBls:0000041.control_mean
10.1573From_analysisRNASeq.briggsae.WBls:0000041.control_median
10.7181From_analysisRNASeq.briggsae.WBls:0000041.control_mean
19.6337From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
20.3376From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.872318From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
1.54419From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
1.56397From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
1.97541From_analysisRNASeq.briggsae.WBls:0000063.control_mean
2.21114From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
3.68543From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
1.60755From_analysisRNASeq.briggsae.WBls:0000063.control_median
1.65113From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
1.92136From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001011.54419From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.6999From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
1.63892From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.37371From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00131289
Ortholog (28)
Paralog (22)
Structured_descriptionAutomated_descriptionPredicted to enable chloride channel activity. Is an ortholog of C. elegans best-9.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG05414
Corresponding_CDS_historyCBG05414:bp194
Corresponding_transcriptCBG05414.1
Other_sequenceCR07415
Oden_isotig19302
CR01307
OVC03702_1
Oden_isotig27028
HC05478
AI670467.1
HCC07132_1
CRC11323_1
Experimental_infoExpr_patternExpr1050071
Microarray_resultsGPL8303_CB6_WBGene00027868_A
GPL8303_CB6_WBGene00027868_B
GPL14143_CBG05414_201-260_0.878_28_C
GPL14143_CBG05414_449-508_0.873_30_B
GPL14143_CBG05414_624-683_0.893_18_A
ReferenceWBPaper00040789
MethodGene