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WormBase Tree Display for Gene: WBGene00027225

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Name Class

WBGene00027225SMapS_parentSequencecb25.fpc0090
IdentityVersion1
NameSequence_nameCBG04582
Molecular_nameCBG04582
CBG04582.1
CBP39989
Other_nameCBG_04582Accession_evidenceNDBHE601135
Public_nameCBG04582
DB_infoDatabaseNDBlocus_tagCBG_04582
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:56WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
Allele (22)
RNASeq_FPKMWBls:00000023.53011From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
3.57081From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
3.61545From_analysisRNASeq.briggsae.WBls:0000002.control_mean
3.74544From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
0.968305From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
2.95367From_analysisRNASeq.briggsae.WBls:0000002.control_mean
3.55046From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.806667From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.983653From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.16064From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
1.05802From_analysisRNASeq.briggsae.WBls:0000003.control_mean
1.20675From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000041.50832From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
1.64029From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
1.77226From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
1.25996From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
1.75371From_analysisRNASeq.briggsae.WBls:0000004.control_mean
1.9833From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
2.24471From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.201276From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.16233From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
2.21043From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.26769From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.21501From_analysisRNASeq.briggsae.WBls:0000027.control_median
3.76142From_analysisRNASeq.briggsae.WBls:0000027.control_mean
8.41437From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000354.61516From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.6837From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
5.93592From_analysisRNASeq.briggsae.WBls:0000038.control_mean
6.02857From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
7.05841From_analysisRNASeq.briggsae.WBls:0000038.control_median
8.08826From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
8.94315From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000412.40171From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
2.69416From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
2.8507From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.00724From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
4.27598From_analysisRNASeq.briggsae.WBls:0000041.control_mean
9.0008From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
4.74305From_analysisRNASeq.briggsae.WBls:0000041.control_median
5.15436From_analysisRNASeq.briggsae.WBls:0000041.control_mean
6.47887From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
7.3434From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000631.22522From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.27724From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
1.34637From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
1.39967From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.10283From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
1.37302From_analysisRNASeq.briggsae.WBls:0000063.control_median
1.53264From_analysisRNASeq.briggsae.WBls:0000063.control_mean
3.06972From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001012.69416From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.59675From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
2.54794From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.6125From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (27)
Paralog (18)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Fibronectin type III superfamily; Fibronectin type III domain; Fibronectin type III; and Immunoglobulin-like fold. Is an ortholog of C. elegans C53A5.13.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG04582
Corresponding_CDS_historyCBG04582:bp194
CBG04582:bp255
Corresponding_transcriptCBG04582.1
Other_sequence (14)
Experimental_infoMicroarray_resultsGPL8303_CB6_WBGene00027225_B
GPL14143_CBG04582_1699-1758_0.919_11_A
GPL14143_CBG04582_1766-1825_0.947_2_C
Expression_clusterWBPaper00058955:heatshock_upregulated_CBG
MethodGene