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WormBase Tree Display for Gene: WBGene00026686

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Name Class

WBGene00026686SMapS_parentSequencecb25.fpc0071c2
IdentityVersion2
NameCGC_nameCbr-ekl-7From_analysisInferred_from_orthology
Sequence_nameCBG03924
Molecular_nameCBG03924
CBG03924.1
CBP06601
CBG03924.2
CBG03924.3
CBG03924.4
Other_nameCBG_03924Accession_evidenceNDBHE600906
Public_nameCbr-ekl-7
DB_infoDatabaseNDBlocus_tagCBG_03924
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:56WBPerson1971EventImportedInitial conversion from brigace
229 Apr 2015 12:22:06WBPerson2970Name_changeCGC_nameCbr-ekl-7
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classekl
RNASeq_FPKMWBls:000000210.8098From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
13.0914From_analysisRNASeq.briggsae.WBls:0000002.control_mean
13.842From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
14.6223From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
14.2322From_analysisRNASeq.briggsae.WBls:0000002.control_median
15.6013From_analysisRNASeq.briggsae.WBls:0000002.control_mean
23.131From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000032.43245From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
2.70556From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
2.97868From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
3.25696From_analysisRNASeq.briggsae.WBls:0000003.control_mean
4.35975From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000041.19027From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
1.24967From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
1.30907From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
1.3421From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
1.44214From_analysisRNASeq.briggsae.WBls:0000004.control_mean
1.58307From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
1.78621From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (11)
WBls:00000270.074233From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.410231From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.15646From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.615346From_analysisRNASeq.briggsae.WBls:0000027.control_median
0.645093From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.34968From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000351.00005From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.798117From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
12.6884From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
6.11796From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
6.66652From_analysisRNASeq.briggsae.WBls:0000038.control_median
6.70489From_analysisRNASeq.briggsae.WBls:0000038.control_mean
7.21508From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:0000041115.197From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
22.3947From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
25.908From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
26.1966From_analysisRNASeq.briggsae.WBls:0000041.control_median
26.4852From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
47.4962From_analysisRNASeq.briggsae.WBls:0000041.control_mean
106.061From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
59.2173From_analysisRNASeq.briggsae.WBls:0000041.control_median
64.6659From_analysisRNASeq.briggsae.WBls:0000041.control_mean
91.9493From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006352.6259From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
59.6747From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
65.9659From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
66.9229From_analysisRNASeq.briggsae.WBls:0000063.control_mean
66.9786From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
89.3695From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
34.1623From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
61.4628From_analysisRNASeq.briggsae.WBls:0000063.control_mean
62.8203From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010120.7971From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
6.11796From_analysisRNASeq.briggsae.total_over_all_stages.control_median
22.8642From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
5.23885From_analysisRNASeq.briggsae.total_over_all_stages.control_median
Contained_in_operonCBOPA0666
Ortholog (23)
ParalogWBGene00024737Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs affected by Cbr-htz-1 and Cbr-spr-4 based on RNA-seq studies. Is an ortholog of C. elegans ekl-7.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG03924
Corresponding_CDS_historyCBG03924:bp194
Corresponding_transcriptCBG03924.1
CBG03924.2
CBG03924.3
CBG03924.4
Experimental_infoExpr_patternExpr1058990
Microarray_resultsGPL8303_CB6_WBGene00026686_A
GPL8303_CB6_WBGene00026686_B
GPL14143_CBG03924_949-1008_0.931_6_B
GPL14143_CBG03924_1315-1374_0.875_34_A
GPL14143_CBG03924_1414-1473_0.953_1_C
Expression_clusterWBPaper00059178:Cbr-htz-1(gu167)_upregulated
WBPaper00059178:Cbr-spr-4(gu163)_upregulated
MethodGene