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WormBase Tree Display for Gene: WBGene00026235

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Name Class

WBGene00026235SMapS_parentSequencecb25.fpc0063
IdentityVersion2
NameCGC_nameCbr-lin-22From_analysisInferred_from_orthology
Sequence_nameCBG03361
Molecular_nameCBG03361
CBG03361.1
CBP06498
Other_nameCBG_03361Accession_evidenceNDBHE601244
Public_nameCbr-lin-22
DB_infoDatabaseNDBlocus_tagCBG_03361
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:55WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-lin-22
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlin
RNASeq_FPKMWBls:00000020.610247From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
0.618996From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
0.963661From_analysisRNASeq.briggsae.WBls:0000002.control_mean
1.66174From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
0.770338From_analysisRNASeq.briggsae.WBls:0000002.control_median
0.921681From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
0.953166From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000031.75566From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
1.81264From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.86962From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.716956From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
1.44741From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000043.28933From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
4.17672From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
5.06411From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
5.1241From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
5.65902From_analysisRNASeq.briggsae.WBls:0000004.control_mean
6.99907From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
7.8185From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.160217From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.758444From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
2.54211From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.70766From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.27417From_analysisRNASeq.briggsae.WBls:0000027.control_median
1.78989From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
2.35405From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000353.10948From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.48939From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
2.2947From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
3.08128From_analysisRNASeq.briggsae.WBls:0000038.control_median
3.395From_analysisRNASeq.briggsae.WBls:0000038.control_mean
3.86786From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
6.92804From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000410.349429From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.44574From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.466859From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.487978From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.680227From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.43776From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.580549From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.673121From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
0.76646From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.20473From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.384466From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.470456From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.643102From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.800399From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
1.56019From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.599114From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.657214From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.727772From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001011.56019From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.0053From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
1.49898From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.21394From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00129695
Ortholog (20)
Structured_descriptionAutomated_descriptionPredicted to enable protein dimerization activity. Is an ortholog of C. elegans lin-22. In C. elegans, lin-22 is involved in anterior/posterior pattern specification; negative regulation of gene expression; and nematode male tail tip morphogenesis.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG03361
Corresponding_CDS_historyCBG03361:bp194
Corresponding_transcriptCBG03361.1
Other_sequenceEX916391.1
EG025731.1
JI172553.1
FG580067.1
FG582685.1
HBC05050_1
HBC04228_1
Experimental_infoExpr_patternExpr1059968
Microarray_resultsGPL8303_CB6_WBGene00026235_A
GPL8303_CB6_WBGene00026235_B
GPL14143_CBG03361_2-61_0.885_25_C
GPL14143_CBG03361_217-276_0.904_19_B
GPL14143_CBG03361_379-438_0.970_1_A
MethodGene