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WormBase Tree Display for Gene: WBGene00026080

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Name Class

WBGene00026080SMapS_parentSequencecb25.fpc0058
IdentityVersion2
NameCGC_nameCbr-rab-21From_analysisInferred_from_orthology
Sequence_nameCBG03162
Molecular_nameCBG03162
CBG03162.1
CBP14514
Other_nameCBG_03162Accession_evidenceNDBHE601438
Public_nameCbr-rab-21
DB_infoDatabaseNDBlocus_tagCBG_03162
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:55WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-rab-21
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrab
RNASeq_FPKMWBls:000000230.209From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
34.1269From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
35.9306From_analysisRNASeq.briggsae.WBls:0000002.control_mean
43.4559From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
38.7914From_analysisRNASeq.briggsae.WBls:0000002.control_median
40.3882From_analysisRNASeq.briggsae.WBls:0000002.control_mean
53.7612From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000345.9879From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
47.6269From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
49.2658From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
48.0156From_analysisRNASeq.briggsae.WBls:0000003.control_mean
48.7931From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000422.5517From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
25.9506From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
29.3494From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
22.4969From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
23.4736From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
25.2526From_analysisRNASeq.briggsae.WBls:0000004.control_mean
28.3916From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.550149From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
10.3209From_analysisRNASeq.briggsae.WBls:0000027.control_mean
27.594From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.81844From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
10.8674From_analysisRNASeq.briggsae.WBls:0000027.control_mean
12.5069From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
7.66267From_analysisRNASeq.briggsae.WBls:0000027.control_median
WBls:000003513.6503From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003816.501From_analysisRNASeq.briggsae.WBls:0000038.control_mean
18.9287From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
19.8335From_analysisRNASeq.briggsae.WBls:0000038.control_median
20.7382From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
21.8602From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
4.47677From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004117.6598From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
51.0863From_analysisRNASeq.briggsae.WBls:0000041.control_mean
59.6986From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
59.9827From_analysisRNASeq.briggsae.WBls:0000041.control_median
60.2669From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
66.7198From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
21.0147From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
28.2919From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
42.2753From_analysisRNASeq.briggsae.WBls:0000041.control_mean
43.9953From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006319.4198From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
23.1788From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
23.5446From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
27.3662From_analysisRNASeq.briggsae.WBls:0000063.control_mean
27.9788From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
42.709From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
25.7617From_analysisRNASeq.briggsae.WBls:0000063.control_median
28.5738From_analysisRNASeq.briggsae.WBls:0000063.control_mean
34.6116From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010122.5517From_analysisRNASeq.briggsae.total_over_all_stages.control_median
26.8034From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
23.3262From_analysisRNASeq.briggsae.total_over_all_stages.control_median
27.6484From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00129533
00129534
00129535
00129536
Ortholog (27)
Paralog (31)
Structured_descriptionAutomated_descriptionPredicted to enable GTP binding activity and GTPase activity. Predicted to be involved in signal transduction. Predicted to be located in membrane. Is an ortholog of C. elegans rab-21.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG03162
Corresponding_CDS_historyCBG03162:bp194
CBG03162:bp255
Corresponding_transcriptCBG03162.1
Other_sequence (39)
Experimental_infoExpr_patternExpr1058770
Microarray_resultsGPL8303_CB6_WBGene00026080_A
GPL8303_CB6_WBGene00026080_B
GPL8303_CB6_WBGene00026080_C
GPL14143_CBG03162_34-93_0.861_14_B
GPL14143_CBG03162_159-218_0.889_5_C
GPL14143_CBG03162_196-255_0.845_18_A
MethodGene