WormBase Tree Display for Gene: WBGene00025891

WBGene00025891 SMap: S_parent: Sequence: cb25.fpc0058
  Identity: Version: 2
    Name: CGC_name: Cbr-raga-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBG02932
      Molecular_name: CBG02932
        CBG02932.1
        CBP14636
      Other_name: CBG_02932 Accession_evidence: NDB HE601438
      Public_name: Cbr-raga-1
    DB_info: Database: NDB locus_tag CBG_02932
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:55 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Jul 2007 11:50:19 WBPerson2970 Name_change: CGC_name: Cbr-raga-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: raga
    RNASeq_FPKM: WBls:0000002 28.6575 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        45.574 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        52.2305 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        82.4599 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        55.3401 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        55.4494 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        65.1063 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 54.13 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        56.6746 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        59.2193 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
        61.3594 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        70.729 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 57.0451 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBls:0000004.control_median
        57.8209 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        58.5967 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        53.8572 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        56.0951 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        56.8907 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        58.8596 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 24.3181 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        2.45496 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        62.2462 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        8.25324 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        18.6179 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        25.4842 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        28.9825 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 33.0193 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 12.6075 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        29.447 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        30.0135 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        30.58 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        38.5065 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        81.3916 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
      WBls:0000041 45.3564 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        59.1313 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        61.6009 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        62.9689 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        64.3369 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        65.2309 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        55.7779 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        61.0345 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        73.9041 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 42.3883 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        44.8613 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        50.1301 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        50.8841 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        52.5948 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        74.7102 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        42.0857 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        47.4957 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        50.8433 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 45.7609 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        47.1116 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        48.2227 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        52.3707 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
    GO_annotation: 00129307
    Ortholog (31)
    Paralog: WBGene00028445 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable GTP binding activity. Is an ortholog of C. elegans raga-1. In C. elegans, raga-1 is involved in several processes, including determination of adult lifespan; positive regulation of TOR signaling; and regulation of growth. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG02932
    Corresponding_CDS_history: CBG02932:bp194
    Corresponding_transcript: CBG02932.1
    Other_sequence (41)
  Experimental_info: Expr_pattern: Expr1054293
    Microarray_results: GPL8303_CB6_WBGene00025891_A
      GPL8303_CB6_WBGene00025891_B
      GPL8303_CB6_WBGene00025891_C
      GPL14143_CBG02932_256-315_0.824_17_B
      GPL14143_CBG02932_487-546_0.845_4_A
      GPL14143_CBG02932_664-723_0.825_15_C
  Method: Gene