WormBase Tree Display for Gene: WBGene00025028

WBGene00025028 SMap: S_parent: Sequence: cb25.fpc0039
  Identity: Version: 2
    Name: CGC_name: Cbr-scl-5 From_analysis: Inferred_from_orthology
      Sequence_name: CBG01847
      Molecular_name: CBG01847
        CBG01847.1
        CBP06099
      Other_name: CBG_01847 Accession_evidence: NDB HE601298
      Public_name: Cbr-scl-5
    DB_info: Database: NDB locus_tag CBG_01847
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:54 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 21 Apr 2008 17:10:52 WBPerson2970 Name_change: CGC_name: Cbr-scl-5
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: scl
    RNASeq_FPKM: WBls:0000002 49.7116 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        62.678 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        7.69997 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        78.7568 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        31.3035 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        45.1096 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        46.9907 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
      WBls:0000003 0.046327 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        0.092654 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        0.030885 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 0 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        0.068434 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        0.342171 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 12.6694 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        1.42324 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        31.5416 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        5.04336 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        18.2925 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        18.4234 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        35.6853 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 75.9558 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 12.863 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        25.6695 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        2.66767 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        28.4966 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        38.4759 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        59.9797 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
      WBls:0000041 17.6193 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        18.0727 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        24.0046 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        29.9364 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        37.3214 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        83.6571 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        119.166 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        56.7967 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        61.1219 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        98.2797 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 12.6703 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        4.82314 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        7.13785 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        7.2605 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        7.37617 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        7.85359 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        12.9386 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        38.3637 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        7.31834 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
      WBls:0000101 12.863 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        34.6263 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        15.2411 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        34.929 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    Ortholog (39)
    Paralog (48)
    Structured_description: Automated_description: Is affected by Cbr-spr-4 based on RNA-seq studies. Is predicted to encode a protein with the following domains: Cysteine-rich secretory protein-related; CAP superfamily; CAP domain; Venom allergen 5-like; and Cysteine-rich secretory protein family. Is an ortholog of C. elegans scl-5. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG01847
    Corresponding_CDS_history: CBG01847:bp194
    Corresponding_transcript: CBG01847.1
    Other_sequence (31)
  Experimental_info: Expr_pattern: Expr1053884
    Microarray_results: GPL8303_CB6_WBGene00025028_A
      GPL8303_CB6_WBGene00025028_B
      GPL14143_CBG01847_99-158_0.904_22_C
      GPL14143_CBG01847_370-429_0.922_10_B
      GPL14143_CBG01847_459-518_0.939_3_A
    Expression_cluster: WBPaper00059178:Cbr-spr-4(gu163)_upregulated
  Method: Gene