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WormBase Tree Display for Gene: WBGene00024976

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Name Class

WBGene00024976SMapS_parentSequencecb25.fpc0039
IdentityVersion2
NameCGC_nameCbr-fat-2From_analysisInferred_from_orthology
Sequence_nameCBG01790
Molecular_nameCBG01790
CBG01790.1
CBP06086
Other_nameCBG_01790Accession_evidenceNDBHE601298
Public_nameCbr-fat-2
DB_infoDatabaseNDBlocus_tagCBG_01790
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:54WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-fat-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classfat
RNASeq_FPKMWBls:0000002181.647From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
214.935From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
349.671From_analysisRNASeq.briggsae.WBls:0000002.control_mean
652.431From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
273.672From_analysisRNASeq.briggsae.WBls:0000002.control_median
332.41From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
345.356From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.246896From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
1.4704From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
2.6939From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0.472605From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
1.1378From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000041.43024From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
1.46555From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
1.50085From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
1.56343From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
1.65148From_analysisRNASeq.briggsae.WBls:0000004.control_mean
1.79267From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
1.97021From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:0000027182.138From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
23.5404From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
66.1509From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
90.6098From_analysisRNASeq.briggsae.WBls:0000027.control_mean
124.145From_analysisRNASeq.briggsae.WBls:0000027.control_median
154.623From_analysisRNASeq.briggsae.WBls:0000027.control_mean
346.661From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:0000035332.443From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038121.401From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
207.696From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
270.682From_analysisRNASeq.briggsae.WBls:0000038.control_mean
273.03From_analysisRNASeq.briggsae.WBls:0000038.control_median
338.365From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
415.266From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:0000041181.955From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
292.706From_analysisRNASeq.briggsae.WBls:0000041.control_mean
297.216From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
309.477From_analysisRNASeq.briggsae.WBls:0000041.control_median
321.737From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
369.916From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
345.827From_analysisRNASeq.briggsae.WBls:0000041.control_median
374.361From_analysisRNASeq.briggsae.WBls:0000041.control_mean
430.353From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
644.986From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:0000063284.856From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
285.5From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
293.377From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
294.828From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
319.657From_analysisRNASeq.briggsae.WBls:0000063.control_mean
439.723From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
196.46From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
289.439From_analysisRNASeq.briggsae.WBls:0000063.control_median
299.124From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:0000101244.479From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
284.856From_analysisRNASeq.briggsae.total_over_all_stages.control_median
238.067From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
284.296From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00128392
00128393
Ortholog (32)
ParalogWBGene00024977Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water. Predicted to be involved in lipid metabolic process. Is an ortholog of C. elegans fat-2. In C. elegans, fat-2 is involved in several processes, including collagen and cuticulin-based cuticle development; fatty acid biosynthetic process; and innate immune response.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG01790
Corresponding_CDS_historyCBG01790:bp194
Corresponding_transcriptCBG01790.1
Other_sequence (153)
Experimental_infoExpr_patternExpr1069014
Microarray_resultsGPL8303_CB6_WBGene00024976_A
GPL8303_CB6_WBGene00024976_B
GPL14143_CBG01790_341-400_0.890_36_C
GPL14143_CBG01790_694-753_0.933_10_B
GPL14143_CBG01790_860-919_0.934_9_A
MethodGene