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WormBase Tree Display for Gene: WBGene00024971

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Name Class

WBGene00024971SMapS_parentSequencecb25.fpc0039
IdentityVersion2
NameCGC_nameCbr-agt-1From_analysisInferred_from_orthology
Sequence_nameCBG01784
Molecular_nameCBG01784
CBG01784.1
CBP38856
Other_nameCBG_01784Accession_evidenceNDBHE601298
Public_nameCbr-agt-1
DB_infoDatabaseNDBlocus_tagCBG_01784
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:54WBPerson1971EventImportedInitial conversion from brigace
215 Oct 2007 15:19:45WBPerson2970Name_changeCGC_nameCbr-agt-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classagt
RNASeq_FPKMWBls:000000210.8619From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
11.9524From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
14.2178From_analysisRNASeq.briggsae.WBls:0000002.control_mean
19.8391From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
15.7742From_analysisRNASeq.briggsae.WBls:0000002.control_mean
15.8958From_analysisRNASeq.briggsae.WBls:0000002.control_median
20.4433From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000310.2523From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
11.8613From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
13.4703From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
12.3446From_analysisRNASeq.briggsae.WBls:0000003.control_mean
13.3111From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000414.8765From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
15.5538From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
16.2311From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
12.7324From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
15.6141From_analysisRNASeq.briggsae.WBls:0000004.control_mean
16.6914From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
17.5391From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002712.1799From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.40912From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
5.25688From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
6.28197From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.87522From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.95592From_analysisRNASeq.briggsae.WBls:0000027.control_median
8.65496From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003510.1549From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003812.6523From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
13.9556From_analysisRNASeq.briggsae.WBls:0000038.control_median
15.2588From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
18.2546From_analysisRNASeq.briggsae.WBls:0000038.control_mean
36.0923From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
9.01497From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004113.3151From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
13.8133From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
14.0509From_analysisRNASeq.briggsae.WBls:0000041.control_median
14.2153From_analysisRNASeq.briggsae.WBls:0000041.control_mean
14.2885From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
15.4442From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
14.8664From_analysisRNASeq.briggsae.WBls:0000041.control_median
16.9199From_analysisRNASeq.briggsae.WBls:0000041.control_mean
17.4695From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
27.1887From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006314.5432From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
16.4867From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
16.8328From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
17.269From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
19.8059From_analysisRNASeq.briggsae.WBls:0000063.control_mean
33.898From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
14.1972From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
16.6597From_analysisRNASeq.briggsae.WBls:0000063.control_median
18.8711From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010113.8133From_analysisRNASeq.briggsae.total_over_all_stages.control_median
14.0132From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
14.2429From_analysisRNASeq.briggsae.total_over_all_stages.control_median
14.595From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00128385
00128386
Ortholog (22)
Structured_descriptionAutomated_descriptionPredicted to enable catalytic activity. Predicted to be involved in DNA repair. Is an ortholog of C. elegans agt-1. In C. elegans, agt-1 is involved in DNA dealkylation involved in DNA repair.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG01784
Corresponding_CDS_historyCBG01784:bp194
CBG01784:bp255
Corresponding_transcriptCBG01784.1
Other_sequenceCBC07082_1
DN153455.1
HBC04906_1
Experimental_infoExpr_patternExpr1063938
Expr1066676
Microarray_resultsGPL8303_CB6_WBGene00024970_B
GPL8303_CB6_WBGene00024971_A
GPL8303_CB6_WBGene00024971_B
GPL14143_CBG01783_247-306_0.910_4_C
GPL14143_CBG01783_257-316_0.955_1_A
GPL14143_CBG01784_61-120_0.910_16_C
GPL14143_CBG01784_128-187_0.944_3_B
GPL14143_CBG01784_488-547_0.959_1_A
MethodGene