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WormBase Tree Display for Gene: WBGene00024832

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Name Class

WBGene00024832SMapS_parentSequencecb25.fpc0039
IdentityVersion1
NameSequence_nameCBG01620
Molecular_nameCBG01620
CBG01620.1
CBP06119
Other_nameCBG_01620Accession_evidenceNDBHE601298
Public_nameCBG01620
DB_infoDatabaseNDBlocus_tagCBG_01620
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:54WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
Allele (19)
RNASeq_FPKMWBls:00000021.48903From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
6.01188From_analysisRNASeq.briggsae.WBls:0000002.control_mean
7.94422From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
8.6024From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
3.08049From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
5.27904From_analysisRNASeq.briggsae.WBls:0000002.control_mean
5.51235From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.164482From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.328963From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
1e-06From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
0.109655From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.444631From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
0.559From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.67337From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0.308553From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0.37359From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
0.48666From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.633158From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000271.35854From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
4.47392From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
4.80795From_analysisRNASeq.briggsae.WBls:0000027.control_mean
8.5914From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
20.6644From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
6.53266From_analysisRNASeq.briggsae.WBls:0000027.control_median
8.77207From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003516.783From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003811.2379From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
21.6001From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
2.29735From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
3.96588From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
7.60189From_analysisRNASeq.briggsae.WBls:0000038.control_median
9.77531From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:000004111.6357From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
2.13985From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
2.27086From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
2.41763From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.56441From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
4.65271From_analysisRNASeq.briggsae.WBls:0000041.control_mean
11.6432From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
12.0433From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
7.04955From_analysisRNASeq.briggsae.WBls:0000041.control_mean
7.10006From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:00000630.850449From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.88522From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
1.22397From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.22474From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
1.53444From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
1.62502From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
1.37959From_analysisRNASeq.briggsae.WBls:0000063.control_median
1.58902From_analysisRNASeq.briggsae.WBls:0000063.control_mean
3.41426From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001012.29735From_analysisRNASeq.briggsae.total_over_all_stages.control_median
6.90064From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
2.43088From_analysisRNASeq.briggsae.total_over_all_stages.control_median
6.63893From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Contained_in_operonCBOPA0519
Ortholog (23)
Structured_descriptionAutomated_descriptionIs affected by Cbr-spr-4 based on RNA-seq studies. Is predicted to encode a protein with the following domains: ShK domain-like and ShKT domain. Is an ortholog of C. elegans M04G7.1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG01620
Corresponding_CDS_historyCBG01620:bp194
Corresponding_transcriptCBG01620.1
Other_sequenceCBC12410_1
Experimental_infoExpr_patternExpr1065081
Microarray_resultsGPL8303_CB6_WBGene00024832_A
GPL8303_CB6_WBGene00024832_B
GPL14143_CBG01620_43-102_0.867_19_C
GPL14143_CBG01620_182-241_0.928_5_B
GPL14143_CBG01620_256-315_0.911_8_A
Expression_clusterWBPaper00059178:Cbr-spr-4(gu163)_upregulated
MethodGene