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WormBase Tree Display for Gene: WBGene00024680

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Name Class

WBGene00024680SMapS_parentSequencecb25.fpc0023
IdentityVersion2
NameCGC_nameCbr-nhr-114From_analysisInferred_from_orthology
Sequence_nameCBG01439
Molecular_nameCBG01439
CBG01439.1
CBP20919
Other_nameCBG_01439Accession_evidenceNDBHE601256
Public_nameCbr-nhr-114
DB_infoDatabaseNDBlocus_tagCBG_01439
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:54WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-nhr-114
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
RNASeq_FPKMWBls:000000256.5295From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
65.1041From_analysisRNASeq.briggsae.WBls:0000002.control_mean
65.4851From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
73.2978From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
35.8772From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
57.7974From_analysisRNASeq.briggsae.WBls:0000002.control_mean
61.0073From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000033.97776From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
4.15567From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
4.33359From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
2.76859From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
3.69331From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000414.6554From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
14.7241From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
14.7928From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
10.1258From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
14.2954From_analysisRNASeq.briggsae.WBls:0000004.control_mean
14.7904From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
17.1127From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002727.8427From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
30.7893From_analysisRNASeq.briggsae.WBls:0000027.control_mean
54.6564From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
9.86889From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
19.5107From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
23.6767From_analysisRNASeq.briggsae.WBls:0000027.control_median
27.9697From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003533.4367From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003827.524From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
29.4489From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
30.2191From_analysisRNASeq.briggsae.WBls:0000038.control_median
30.9893From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
40.6853From_analysisRNASeq.briggsae.WBls:0000038.control_mean
74.7791From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004111.9273From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
22.7735From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
37.8498From_analysisRNASeq.briggsae.WBls:0000041.control_mean
39.8938From_analysisRNASeq.briggsae.WBls:0000041.control_median
57.0141From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
59.6841From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
10.2434From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
17.3504From_analysisRNASeq.briggsae.WBls:0000041.control_median
28.433From_analysisRNASeq.briggsae.WBls:0000041.control_mean
8.95537From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
29.6965From_analysisRNASeq.briggsae.WBls:0000063.control_mean
32.785From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
35.9518From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
38.9246From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
40.8211From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
32.4371From_analysisRNASeq.briggsae.WBls:0000063.control_mean
37.4382From_analysisRNASeq.briggsae.WBls:0000063.control_median
46.14From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010130.9893From_analysisRNASeq.briggsae.total_over_all_stages.control_median
32.408From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
27.6833From_analysisRNASeq.briggsae.total_over_all_stages.control_median
29.0883From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00128025
00128026
00128027
00128028
Ortholog (24)
Paralog (220)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-114. In C. elegans, nhr-114 is involved in regulation of gene expression.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG01439
Corresponding_CDS_historyCBG01439:bp194
Corresponding_transcriptCBG01439.1
Other_sequenceCSC00551_1
CBC02885_1
CRC06189_1
CBC03000_1
CBC06116_1
FD514251.1
CR10753
CGC01249_1
Experimental_infoExpr_patternExpr1063061
Microarray_resultsGPL8303_CB6_WBGene00024680_A
GPL14143_CBG01439_917-976_0.891_8_C
GPL14143_CBG01439_1038-1097_0.945_1_A
GPL14143_CBG01439_1182-1241_0.878_10_B
MethodGene