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WormBase Tree Display for Gene: WBGene00024350

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Name Class

WBGene00024350SMapS_parentSequencecb25.fpc0022b
IdentityVersion2
NameCGC_nameCbr-arc-1From_analysisInferred_from_orthology
Sequence_nameCBG01059
Molecular_nameCBG01059
CBG01059.1
CBP44367
Other_nameCBG_01059Accession_evidenceNDBHE600951
Public_nameCbr-arc-1
DB_infoDatabaseNDBlocus_tagCBG_01059
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:54WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-arc-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classarc
AlleleWBVar00066521
WBVar00066526
RNASeq_FPKMWBls:000000210.2097From_analysisRNASeq.briggsae.WBls:0000002.control_mean
10.5241From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
13.8951From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
6.20983From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
7.61812From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
9.07111From_analysisRNASeq.briggsae.WBls:0000002.control_median
9.56179From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000317.7977From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
19.0905From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
20.3833From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
21.2758From_analysisRNASeq.briggsae.WBls:0000003.control_mean
25.6465From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000415.4355From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
16.3011From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
17.1666From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
14.0091From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
14.8104From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
15.886From_analysisRNASeq.briggsae.WBls:0000004.control_mean
18.0084From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.442924From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
10.9845From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.31555From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
4.24766From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.12269From_analysisRNASeq.briggsae.WBls:0000027.control_median
4.9182From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.92984From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000356.80609From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.961902From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
11.4249From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
6.35338From_analysisRNASeq.briggsae.WBls:0000038.control_mean
6.43091From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
6.51336From_analysisRNASeq.briggsae.WBls:0000038.control_median
6.59582From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:000004114.6886From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
15.1311From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
15.6923From_analysisRNASeq.briggsae.WBls:0000041.control_mean
15.7572From_analysisRNASeq.briggsae.WBls:0000041.control_median
16.3833From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
16.5663From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
16.4748From_analysisRNASeq.briggsae.WBls:0000041.control_median
16.7809From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
17.1124From_analysisRNASeq.briggsae.WBls:0000041.control_mean
23.1241From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000634.77281From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
5.07516From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
5.07794From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
5.7137From_analysisRNASeq.briggsae.WBls:0000063.control_mean
5.9893From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
7.65331From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
5.53362From_analysisRNASeq.briggsae.WBls:0000063.control_median
6.14457From_analysisRNASeq.briggsae.WBls:0000063.control_mean
8.2989From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001018.92869From_analysisRNASeq.briggsae.total_over_all_stages.control_median
9.53607From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
10.5204From_analysisRNASeq.briggsae.total_over_all_stages.control_median
10.8361From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00127689
00127690
00127691
Contained_in_operonCBOPA0546
Ortholog (30)
Paralog (15)
Structured_descriptionAutomated_descriptionPredicted to enable GTP binding activity; GTPase activity; and zinc ion binding activity. Is an ortholog of C. elegans arc-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG01059
Corresponding_CDS_historyCBG01059:bp194
CBG01059:bp255
Corresponding_transcriptCBG01059.1
Other_sequenceDviv_isotig17878
ACC38063_1
Acan_isotig08799
Dviv_isotig17877
Tcol_isotig14597
Oden_isotig15279
EY459534.1
Experimental_infoExpr_patternExpr1061399
Microarray_resultsGPL8303_CB6_WBGene00024350_A
GPL14143_CBG01059_417-476_0.784_21_C
GPL14143_CBG01059_1253-1312_0.792_13_B
GPL14143_CBG01059_1281-1340_0.732_101_A
MethodGene