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WormBase Tree Display for Gene: WBGene00023500

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Name Class

WBGene00023500SMapS_parentSequenceC11H1
IdentityVersion1
NameSequence_nameC11H1.9
Molecular_nameC11H1.9
C11H1.9.1
CE05264
Other_nameCELE_C11H1.9Accession_evidenceNDBBX284606
Public_nameC11H1.9
DB_infoDatabaseAceViewgeneXO938
WormFluxgeneWBGene00023500
NDBlocus_tagCELE_C11H1.9
PanthergeneCAEEL|WormBase=WBGene00023500|UniProtKB=Q5WRP2
familyPTHR47159
NCBIgene3564775
RefSeqproteinNM_001029220.5
TrEMBLUniProtAccQ5WRP2
UniProt_GCRPUniProtAccQ5WRP2
SpeciesCaenorhabditis elegans
HistoryVersion_change125 Aug 2004 11:32:31WBPerson1846EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
Allele (47)
RNASeq_FPKM (74)
OrthologWBGene00029360Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00066177Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00139776Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00137290Caenorhabditis japonicaFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00118243Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00222418Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g3646Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g14075Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g15984Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g13498Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g20639Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g24624Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g719Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g18491Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g19362Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g556Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00023.g1425Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-C11H1.9Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold628.g7110Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00401.g10797Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_10592Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_025913Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g01089Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g2527Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0107600Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrX_pilon.g20560Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00239900Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00256710Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00288987Trichuris murisFrom_analysisWormBase-Compara
Paralog (11)
Structured_descriptionAutomated_descriptionEnriched in several structures, including ADE sheath cell; G2; W cell; anterior ganglion; and sensory neurons based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on proteomic; microarray; and RNA-seq studies. Is affected by eleven chemicals including D-glucopyranose; levamisole; and Psoralens based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: GOLD domain superfamily; CRAL/TRIO domain; CRAL-TRIO lipid binding domain; and CRAL-TRIO lipid binding domain superfamily.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC11H1.9
Corresponding_CDS_historyC11H1.9b:wp271
Corresponding_transcriptC11H1.9.1
Other_sequence (22)
Associated_featureWBsf655722
WBsf671256
WBsf238229
WBsf238230
WBsf238231
WBsf238232
Experimental_infoRNAi_resultWBRNAi00028814Inferred_automaticallyRNAi_primary
WBRNAi00040367Inferred_automaticallyRNAi_primary
WBRNAi00010632Inferred_automaticallyRNAi_primary
Expr_patternExpr1013706
Expr1040142
Expr1144433
Expr2000716
Expr2018938
Drives_constructWBCnstr00023852
Construct_productWBCnstr00023852
Microarray_results (24)
Expression_cluster (156)
Map_infoPositivePositive_cloneC11H1Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionX16.6803
MethodGene