WormBase Tree Display for Gene: WBGene00023485
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| WBGene00023485 | SMap | S_parent | Sequence | E02C12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ttr-49 | |||||||
| Sequence_name | E02C12.13 | ||||||||
| Molecular_name | E02C12.13 | ||||||||
| E02C12.13.1 | |||||||||
| CE37216 | |||||||||
| Other_name | CELE_E02C12.13 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | ttr-49 | ||||||||
| DB_info | Database | AceView | gene | 5J836 | |||||
| WormFlux | gene | WBGene00023485 | |||||||
| NDB | locus_tag | CELE_E02C12.13 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00023485|UniProtKB=Q65ZI4 | |||||||
| family | PTHR21700 | ||||||||
| NCBI | gene | 3564895 | |||||||
| RefSeq | protein | NM_001028590.7 | |||||||
| TREEFAM | TREEFAM_ID | TF315773 | |||||||
| TrEMBL | UniProtAcc | Q65ZI4 | |||||||
| UniProt_GCRP | UniProtAcc | Q65ZI4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 12 Aug 2004 16:16:11 | WBPerson1867 | Event | Created | |||
| 2 | 20 Sep 2007 11:48:01 | WBPerson2970 | Name_change | CGC_name | ttr-49 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ttr | ||||||||
| Allele (17) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00081709 | ||||||||
| 00126868 | |||||||||
| Contained_in_operon | CEOP5540 | ||||||||
| Ortholog (15) | |||||||||
| Paralog (62) | |||||||||
| Structured_description | Automated_description | Predicted to be located in cell surface and extracellular region. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | E02C12.13 | |||||||
| Corresponding_transcript | E02C12.13.1 | ||||||||
| Other_sequence | CBC05592_1 | ||||||||
| CRC09613_1 | |||||||||
| Hbac_isotig03396 | |||||||||
| CSC01084_1 | |||||||||
| JI212421.1 | |||||||||
| FD517080.1 | |||||||||
| CR08182 | |||||||||
| Associated_feature | WBsf652907 | ||||||||
| WBsf652908 | |||||||||
| WBsf234227 | |||||||||
| WBsf234228 | |||||||||
| WBsf234229 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00012636 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00043589 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1024705 | ||||||||
| Expr1147578 | |||||||||
| Expr2017616 | |||||||||
| Expr2035754 | |||||||||
| Drives_construct | WBCnstr00023863 | ||||||||
| Construct_product | WBCnstr00023863 | ||||||||
| Microarray_results | SMD_E02C12.4 | ||||||||
| 186157_at | |||||||||
| A_12_P137860 | |||||||||
| A_12_P170242 | |||||||||
| A_12_P170243 | |||||||||
| Aff_E02C12.4 | |||||||||
| GPL13394_WBGene00023485 | |||||||||
| GPL13914_E02C12.13 | |||||||||
| GPL14144_E02C12.13_216-275_0.932_2_A | |||||||||
| GPL14144_E02C12.13_282-341_0.887_13_C | |||||||||
| GPL14144_E02C12.13_36-95_0.934_1_B | |||||||||
| GPL19516_CGZ0014057 | |||||||||
| GPL21109_E02C12.13 | |||||||||
| GPL3518_CE04313 | |||||||||
| GPL8304_CE_WBGene00023485_A | |||||||||
| GPL8673_E02C12_13P00036 | |||||||||
| GPL8673_E02C12_13P00040 | |||||||||
| GPL8673_E02C12_13P00045 | |||||||||
| Expression_cluster (144) | |||||||||
| Map_info | Map | V | Position | 2.01227 | Error | 0.000976 | |||
| Positive | Positive_clone | E02C12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
