WormBase Tree Display for Gene: WBGene00023477
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| WBGene00023477 | SMap | S_parent | Sequence | C03G5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nspc-1 | Person_evidence | WBPerson655 | |||||
| Sequence_name | C03G5.8 | ||||||||
| Molecular_name | C03G5.8 | ||||||||
| C03G5.8.1 | |||||||||
| CE37182 | |||||||||
| Other_name | CELE_C03G5.8 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | nspc-1 | ||||||||
| DB_info | Database | AceView | gene | XJ152 | |||||
| WormFlux | gene | WBGene00023477 | |||||||
| NDB | locus_tag | CELE_C03G5.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00023477|UniProtKB=Q65ZI6 | |||||||
| family | PTHR31330 | ||||||||
| NCBI | gene | 259717 | |||||||
| RefSeq | protein | NM_001029181.7 | |||||||
| TREEFAM | TREEFAM_ID | TF318876 | |||||||
| TrEMBL | UniProtAcc | Q65ZI6 | |||||||
| UniProt_GCRP | UniProtAcc | Q65ZI6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 04 Aug 2004 22:11:54 | WBPerson1849 | Event | Created | |||
| 2 | 18 May 2005 14:07:22 | WBPerson2970 | Name_change | CGC_name | nspc-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nspc | ||||||||
| Allele | WBVar01470181 | ||||||||
| WBVar01499963 | |||||||||
| WBVar01499781 | |||||||||
| WBVar01500168 | |||||||||
| WBVar01500169 | |||||||||
| WBVar01499642 | |||||||||
| WBVar00253334 | |||||||||
| WBVar01498960 | |||||||||
| WBVar01500067 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (259) | |||||||||
| Paralog (17) | |||||||||
| Structured_description | Automated_description | Enriched in excretory gland cell and neurons based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on RNA-seq and microarray studies. Is affected by fifteen chemicals including Ethanol; rotenone; and mianserin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C03G5.8 | |||||||
| Corresponding_transcript | C03G5.8.1 | ||||||||
| Other_sequence | CBC00222_5 | ||||||||
| CBC00222_1 | |||||||||
| CBC00738_2 | |||||||||
| CBC00222_3 | |||||||||
| CBC13477_1 | |||||||||
| FD516820.1 | |||||||||
| CBC07439_1 | |||||||||
| CBC00738_1 | |||||||||
| CBC00222_2 | |||||||||
| Associated_feature | WBsf237696 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00039534 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00047106 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1143640 | ||||||||
| Expr2014470 | |||||||||
| Expr2032710 | |||||||||
| Drives_construct | WBCnstr00023866 | ||||||||
| Construct_product | WBCnstr00023866 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (117) | |||||||||
| Map_info | Map | X | Position | 0.099404 | |||||
| Positive | Positive_clone | C03G5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00064841 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
