WormBase Tree Display for Gene: WBGene00023455
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| WBGene00023455 | SMap | S_parent | Sequence | C10B5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | mir-358 | Person_evidence | WBPerson18 | |||||
| Sequence_name | F25G6.11 | ||||||||
| Molecular_name | F25G6.11 | ||||||||
| F25G6.11a | |||||||||
| F25G6.11b | |||||||||
| Other_name | cel-mir-358 | Remark | miRBase V21 import | ||||||
| Cel-Mir-358-v1 | Remark | MirGeneDB 2.1 import | |||||||
| Cel-Mir-358-v2 | Remark | MirGeneDB 2.1 import | |||||||
| CELE_F25G6.11 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | mir-358 | ||||||||
| DB_info | Database | miRBase | acc | MI0000757 | |||||
| MirGeneDB | cel | Cel-Mir-358-v1 | |||||||
| Cel-Mir-358-v2 | |||||||||
| NDB | locus_tag | CELE_F25G6.11 | |||||||
| NCBI | gene | 24104479 | |||||||
| RefSeq | protein | NR_002398.2 | |||||||
| RNAcentral | URSid | URS00001CAD32 | |||||||
| URS00001D2887 | |||||||||
| URS00004308FB | |||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 22 Jul 2004 12:39:57 | WBPerson1849 | Event | Created | |||
| 2 | 26 Jul 2004 10:55:59 | WBPerson1971 | Name_change | CGC_name | mir-358 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001265 | |||||||
| Gene_class | mir | ||||||||
| Allele | WBVar01499903 | ||||||||
| WBVar00253045 | |||||||||
| WBVar01031894 | |||||||||
| WBVar01500129 | |||||||||
| WBVar00317498 | |||||||||
| WBVar01499056 | |||||||||
| WBVar00323166 | |||||||||
| WBVar01499316 | |||||||||
| In_cluster | MIR-358 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Structured_description | Concise_description | mir-358 encodes a microRNA, a small non-protein coding RNA and seems to have a potential ortholog in C. briggsae; many of the known microRNAs are involved in post-transcriptional regulation of genes; the precise function of miR-358 is unknown. | Paper_evidence | WBPaper00024441 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 28 Feb 2005 00:00:00 | ||||||||
| Automated_description | Is affected by several genes including eat-2; prg-1; and alg-1 based on RNA-seq studies. Is affected by nicotine and silicon dioxide nanoparticle based on quantitative PCR and microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_transcript | F25G6.11 | |||||||
| F25G6.11a | |||||||||
| F25G6.11b | |||||||||
| Associated_feature | WBsf979132 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00040281 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr8447 | ||||||||
| Drives_construct | WBCnstr00005525 | ||||||||
| Expression_cluster (20) | |||||||||
| Interaction | WBInteraction000542163 | ||||||||
| Map_info | Positive | Inside_rearr | nDf60 | ||||||
| Positive_clone | F25G6 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Mapping_data | Pos_neg_data | 10933 | |||||||
| Interpolated_map_position | V | 1.47521 | |||||||
| Reference | WBPaper00024441 | ||||||||
| WBPaper00031335 | |||||||||
| WBPaper00032187 | |||||||||
| WBPaper00032329 | |||||||||
| WBPaper00035664 | |||||||||
| Method | Gene |
