WormBase Tree Display for Gene: WBGene00022881
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WBGene00022881 | SMap | S_parent | Sequence | ZK1248 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Allele (16) | ||||||
Strain | WBStrain00047571 | |||||
RNASeq_FPKM (74) | ||||||
GO_annotation (13) | ||||||
Contained_in_operon | CEOP2224 | |||||
Ortholog (22) | ||||||
Structured_description | Automated_description | Predicted to enable SUMO ligase activity. Predicted to be involved in double-strand break repair via homologous recombination and protein sumoylation. Predicted to be located in nucleus. Predicted to be part of Smc5-Smc6 complex. Human ortholog(s) of this gene implicated in Seckel syndrome 10. Is an ortholog of human NSMCE2 (NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase). | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Disease_info | Potential_model | DOID:0070008 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:26513) | |
Molecular_info | Corresponding_CDS | ZK1248.11 | ||||
Corresponding_transcript | ZK1248.11.1 | |||||
Other_sequence | CBC05265_1 | |||||
CBC05043_1 | ||||||
Associated_feature | WBsf223104 | |||||
Experimental_info | RNAi_result (17) | |||||
Expr_pattern | Expr1015399 | |||||
Expr1040121 | ||||||
Expr1162601 | ||||||
Expr2008737 | ||||||
Expr2026972 | ||||||
Drives_construct | WBCnstr00023898 | |||||
Construct_product | WBCnstr00023898 | |||||
Microarray_results (17) | ||||||
Expression_cluster (102) | ||||||
Interaction (19) | ||||||
Map_info | Positive | Positive_clone | ZK1248 | Inferred_automatically | From sequence, transcript, pseudogene data | |
Interpolated_map_position | II | -0.900201 | ||||
Reference | WBPaper00038491 | |||||
WBPaper00055090 | ||||||
Method | Gene |