WormBase Tree Display for Gene: WBGene00022864
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WBGene00022864 | SMap | S_parent | Sequence | ZK1236 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Allele | WBVar01500260 | |||||
WBVar01499774 | ||||||
WBVar00844669 | ||||||
WBVar02156659 | ||||||
RNASeq_FPKM (74) | ||||||
Ortholog (30) | ||||||
Paralog | WBGene00044588 | Caenorhabditis elegans | From_analysis | TreeFam | ||
Structured_description | Concise_description | ZK1236.5 encodes a protein with no obvious non-nematode homologs; eitherZK1236.9, or ZK1236.5, or both proteins weakly inhibit DHC-1 in vivo;likewise, either ZK1236.5, or ZK1236.9, or both proteins are required inmass RNAi assays for normal osmoregulation and normally rapid growth. | Paper_evidence | WBPaper00005654 | ||
WBPaper00006395 | ||||||
WBPaper00030897 | ||||||
Curator_confirmed | WBPerson567 | |||||
Date_last_updated | 26 Aug 2007 00:00:00 | |||||
Automated_description | Enriched in NSM; germ line; and intestine based on RNA-seq and microarray studies. Is affected by several genes including hsf-1; let-7; and gld-1 based on proteomic; RNA-seq; and microarray studies. Is affected by seven chemicals including rotenone; Rifampin; and allantoin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | ZK1236.5 | ||||
Corresponding_CDS_history | ZK1236.5:wp131 | |||||
ZK1236.5a:wp143 | ||||||
ZK1236.5b:wp133 | ||||||
Corresponding_transcript | ZK1236.5.1 | |||||
Other_sequence (20) | ||||||
Associated_feature | WBsf651272 | |||||
WBsf227135 | ||||||
Experimental_info | RNAi_result | WBRNAi00005938 | Inferred_automatically | RNAi_primary | ||
WBRNAi00009457 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00027042 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00059167 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1021661 | |||||
Expr1040116 | ||||||
Expr1162586 | ||||||
Expr2008727 | ||||||
Expr2026962 | ||||||
Drives_construct | WBCnstr00023911 | |||||
Construct_product | WBCnstr00023911 | |||||
Microarray_results (17) | ||||||
Expression_cluster (86) | ||||||
Interaction | WBInteraction000008240 | |||||
WBInteraction000008241 | ||||||
WBInteraction000576369 | ||||||
Map_info | Positive | Positive_clone | ZK1236 | Inferred_automatically | From sequence, transcript, pseudogene data | |
Interpolated_map_position | III | -0.261509 | ||||
Method | Gene |