WormBase Tree Display for Gene: WBGene00022858
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WBGene00022858 | SMap | S_parent | Sequence | ZK1193 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||
Name | Sequence_name | ZK1193.2 | |||||
Molecular_name | ZK1193.2a | ||||||
ZK1193.2a.1 | |||||||
CE51973 | |||||||
ZK1193.2b | |||||||
CE52035 | |||||||
ZK1193.2b.1 | |||||||
ZK1193.2b.2 | |||||||
ZK1193.2b.3 | |||||||
Other_name | CELE_ZK1193.2 | Accession_evidence | NDB | BX284606 | |||
Public_name | ZK1193.2 | ||||||
DB_info | Database | AceView | gene | XB26 | |||
WormQTL | gene | WBGene00022858 | |||||
WormFlux | gene | WBGene00022858 | |||||
NDB | locus_tag | CELE_ZK1193.2 | |||||
Panther | gene | CAEEL|WormBase=WBGene00022858|UniProtKB=A0A1X7RBP4 | |||||
family | PTHR47324 | ||||||
NCBI | gene | 180396 | |||||
RefSeq | protein | NM_001351873.3 | |||||
NM_001392714.1 | |||||||
TrEMBL | UniProtAcc | A0A1X7RBR0 | |||||
A0A1X7RBP4 | |||||||
UniProt_GCRP | UniProtAcc | A0A1X7RBP4 | |||||
Species | Caenorhabditis elegans | ||||||
History (2) | |||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Allele (295) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (20) | |||||||
Paralog (23) | |||||||
Structured_description | Automated_description | Enriched in several structures, including ABplpppaaa; ABprpppaaa; gonadal sheath cell; neurons; and retrovesicular ganglion based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; proteomic; and RNA-seq studies. Is affected by twenty-five chemicals including Ethanol; methylmercuric chloride; and Mercuric Chloride based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: von Willebrand factor A-like domain superfamily; von Willebrand factor, type A; and von Willebrand factor type A domain. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | ZK1193.2a | |||||
ZK1193.2b | |||||||
Corresponding_CDS_history | ZK1193.2:wp259 | ||||||
Corresponding_transcript | ZK1193.2a.1 | ||||||
ZK1193.2b.1 | |||||||
ZK1193.2b.2 | |||||||
ZK1193.2b.3 | |||||||
Other_sequence | CRC05726_1 | ||||||
Associated_feature | WBsf670051 | ||||||
WBsf982100 | |||||||
WBsf1003769 | |||||||
WBsf1003770 | |||||||
WBsf1003771 | |||||||
WBsf1022116 | |||||||
WBsf1022117 | |||||||
WBsf236920 | |||||||
Experimental_info | RNAi_result | WBRNAi00016058 | Inferred_automatically | RNAi_primary | |||
WBRNAi00059152 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00059151 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00021830 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00021829 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00021828 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00059153 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00066622 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00038168 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1019017 | ||||||
Expr1021021 | |||||||
Expr1024343 | |||||||
Expr1162572 | |||||||
Expr1162573 | |||||||
Expr1162574 | |||||||
Expr2008722 | |||||||
Expr2026956 | |||||||
Drives_construct | WBCnstr00023914 | ||||||
WBCnstr00023915 | |||||||
Construct_product | WBCnstr00023914 | ||||||
WBCnstr00023915 | |||||||
Microarray_results (49) | |||||||
Expression_cluster (250) | |||||||
Interaction | WBInteraction000258238 | ||||||
WBInteraction000386468 | |||||||
WBInteraction000420708 | |||||||
WBInteraction000543555 | |||||||
WBInteraction000585381 | |||||||
Map_info | Positive | Positive_clone | ZK1193 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Interpolated_map_position | X | -19.9198 | |||||
Reference | WBPaper00033118 | ||||||
WBPaper00055090 | |||||||
WBPaper00065331 | |||||||
Method | Gene |