WormBase Tree Display for Gene: WBGene00022858
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| WBGene00022858 | SMap | S_parent | Sequence | ZK1193 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | Sequence_name | ZK1193.2 | |||||||
| Molecular_name | ZK1193.2a | ||||||||
| ZK1193.2a.1 | |||||||||
| CE51973 | |||||||||
| ZK1193.2b | |||||||||
| CE52035 | |||||||||
| ZK1193.2b.1 | |||||||||
| ZK1193.2b.2 | |||||||||
| ZK1193.2b.3 | |||||||||
| Other_name | CELE_ZK1193.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | ZK1193.2 | ||||||||
| DB_info | Database | AceView | gene | XB26 | |||||
| WormQTL | gene | WBGene00022858 | |||||||
| WormFlux | gene | WBGene00022858 | |||||||
| NDB | locus_tag | CELE_ZK1193.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00022858|UniProtKB=A0A1X7RBP4 | |||||||
| family | PTHR47324 | ||||||||
| NCBI | gene | 180396 | |||||||
| RefSeq | protein | NM_001351873.3 | |||||||
| NM_001392714.1 | |||||||||
| TrEMBL | UniProtAcc | A0A1X7RBR0 | |||||||
| A0A1X7RBP4 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A1X7RBP4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:06 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 28 Apr 2017 01:35:57 | WBPerson1983 | Event | Acquires_merge | WBGene00022859 | ||||
| 3 | 28 Apr 2017 01:35:57 | WBPerson1983 | Event | Acquires_merge | WBGene00022860 | ||||
| Acquires_merge | WBGene00022859 | ||||||||
| WBGene00022860 | |||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (295) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (20) | |||||||||
| Paralog (23) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABplpppaaa; ABprpppaaa; gonadal sheath cell; neurons; and retrovesicular ganglion based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; proteomic; and RNA-seq studies. Is affected by twenty-five chemicals including Ethanol; methylmercuric chloride; and Mercuric Chloride based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: von Willebrand factor A-like domain superfamily; von Willebrand factor, type A; and von Willebrand factor type A domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK1193.2a | |||||||
| ZK1193.2b | |||||||||
| Corresponding_CDS_history | ZK1193.2:wp259 | ||||||||
| Corresponding_transcript | ZK1193.2a.1 | ||||||||
| ZK1193.2b.1 | |||||||||
| ZK1193.2b.2 | |||||||||
| ZK1193.2b.3 | |||||||||
| Other_sequence | CRC05726_1 | ||||||||
| Associated_feature | WBsf670051 | ||||||||
| WBsf982100 | |||||||||
| WBsf1003769 | |||||||||
| WBsf1003770 | |||||||||
| WBsf1003771 | |||||||||
| WBsf1022116 | |||||||||
| WBsf1022117 | |||||||||
| WBsf236920 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00016058 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00059152 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00059151 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021830 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021829 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021828 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00059153 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00066622 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00038168 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1019017 | ||||||||
| Expr1021021 | |||||||||
| Expr1024343 | |||||||||
| Expr1162572 | |||||||||
| Expr1162573 | |||||||||
| Expr1162574 | |||||||||
| Expr2008722 | |||||||||
| Expr2026956 | |||||||||
| Drives_construct | WBCnstr00023914 | ||||||||
| WBCnstr00023915 | |||||||||
| Construct_product | WBCnstr00023914 | ||||||||
| WBCnstr00023915 | |||||||||
| Microarray_results | SMD_ZK1193.2 | ||||||||
| SMD_ZK1193.3 | |||||||||
| SMD_ZK1193.3:2 | |||||||||
| SMD_ZK1193.4 | |||||||||
| 185298_s_at | |||||||||
| 185528_at | |||||||||
| 185642_at | |||||||||
| A_12_P100028 | |||||||||
| A_12_P104629 | |||||||||
| A_12_P114585 | |||||||||
| Aff_ZK1193.2 | |||||||||
| Aff_ZK1193.3 | |||||||||
| Aff_ZK1193.4 | |||||||||
| GPL13394_WBGene00022858 | |||||||||
| GPL13394_WBGene00022859 | |||||||||
| GPL13394_WBGene00022860 | |||||||||
| GPL13914_ZK1193.2 | |||||||||
| GPL13914_ZK1193.3 | |||||||||
| GPL13914_ZK1193.4 | |||||||||
| GPL14144_ZK1193.2_3741-3800_0.929_1_A | |||||||||
| GPL14144_ZK1193.3_1369-1428_0.962_1_A | |||||||||
| GPL14144_ZK1193.4_475-534_0.964_1_A | |||||||||
| GPL19516_CGZ0056303 | |||||||||
| GPL19516_CGZ0056304 | |||||||||
| GPL19516_CGZ0056305 | |||||||||
| GPL21109_ZK1193.2 | |||||||||
| GPL21109_ZK1193.3 | |||||||||
| GPL21109_ZK1193.4 | |||||||||
| GPL3518_CE05127 | |||||||||
| GPL3518_CE05128 | |||||||||
| GPL3518_CE05129 | |||||||||
| GPL8304_CE_WBGene00022858_A | |||||||||
| GPL8304_CE_WBGene00022859_A | |||||||||
| GPL8304_CE_WBGene00022860_A | |||||||||
| GPL8673_ZK1193_2P02664 | |||||||||
| GPL8673_ZK1193_2P02824 | |||||||||
| GPL8673_ZK1193_2P03408 | |||||||||
| GPL8673_ZK1193_3P00112 | |||||||||
| GPL8673_ZK1193_3P00674 | |||||||||
| GPL8673_ZK1193_3P01370 | |||||||||
| GPL8673_ZK1193_4P00123 | |||||||||
| GPL8673_ZK1193_4P00252 | |||||||||
| GPL8673_ZK1193_4P00481 | |||||||||
| GPL9450_ZK1193.2 | |||||||||
| GPL9450_ZK1193.3 | |||||||||
| GPL9450_ZK1193.4 | |||||||||
| cea2.i.58516 | |||||||||
| cea2.i.58525 | |||||||||
| cea2.p.158034 | |||||||||
| Expression_cluster (250) | |||||||||
| Interaction | WBInteraction000258238 | ||||||||
| WBInteraction000386468 | |||||||||
| WBInteraction000420708 | |||||||||
| WBInteraction000543555 | |||||||||
| WBInteraction000585381 | |||||||||
| Map_info | Positive | Positive_clone | ZK1193 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -19.9198 | |||||||
| Reference | WBPaper00033118 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065331 | |||||||||
| Method | Gene |
