WormBase Tree Display for Gene: WBGene00022769
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| WBGene00022769 | SMap | S_parent | Sequence | ZK563 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | sorf-1 | Paper_evidence | WBPaper00049116 | |||||
| Person_evidence | WBPerson2241 | ||||||||
| Sequence_name | ZK563.5 | ||||||||
| Molecular_name | ZK563.5 | ||||||||
| ZK563.5.1 | |||||||||
| CE35817 | |||||||||
| ZK563.5.2 | |||||||||
| Other_name | wdr-91 | ||||||||
| CELE_ZK563.5 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | sorf-1 | ||||||||
| DB_info | Database | AceView | gene | XD996 | |||||
| WormQTL | gene | WBGene00022769 | |||||||
| WormFlux | gene | WBGene00022769 | |||||||
| NDB | locus_tag | CELE_ZK563.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00022769|UniProtKB=Q23533 | |||||||
| family | PTHR13083 | ||||||||
| NCBI | gene | 180626 | |||||||
| RefSeq | protein | NM_076183.9 | |||||||
| SwissProt | UniProtAcc | Q23533 | |||||||
| TREEFAM | TREEFAM_ID | TF317339 | |||||||
| UniProt_GCRP | UniProtAcc | Q23533 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:06 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 19 Feb 2016 12:46:18 | WBPerson2970 | Name_change | CGC_name | sorf-1 | ||||
| 3 | 01 Mar 2016 12:00:11 | WBPerson2970 | Name_change | Other_name | wdr-91 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sorf | ||||||||
| Allele (36) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (29) | |||||||||
| Ortholog (31) | |||||||||
| Structured_description | Automated_description | Predicted to enable phosphatidylinositol 3-kinase inhibitor activity. Involved in organelle fusion and positive regulation of early endosome to late endosome transport. Located in early endosome and late endosome. Is an ortholog of human WDR91 (WD repeat domain 91). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK563.5 | |||||||
| Corresponding_CDS_history | ZK563.5:wp92 | ||||||||
| ZK563.5:wp109 | |||||||||
| ZK563.5a:wp145 | |||||||||
| ZK563.5b:wp145 | |||||||||
| Corresponding_transcript | ZK563.5.1 | ||||||||
| ZK563.5.2 | |||||||||
| Associated_feature | WBsf653837 | ||||||||
| WBsf670313 | |||||||||
| WBsf670314 | |||||||||
| WBsf670315 | |||||||||
| WBsf237171 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00059520 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00038342 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00022065 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr12701 | ||||||||
| Expr1019608 | |||||||||
| Expr1040066 | |||||||||
| Expr1162937 | |||||||||
| Expr2016010 | |||||||||
| Expr2034245 | |||||||||
| Drives_construct | WBCnstr00022454 | ||||||||
| WBCnstr00022457 | |||||||||
| WBCnstr00023990 | |||||||||
| Construct_product | WBCnstr00022454 | ||||||||
| WBCnstr00022457 | |||||||||
| WBCnstr00023990 | |||||||||
| Microarray_results | SMD_ZK563.5 | ||||||||
| 181082_at | |||||||||
| A_12_P101996 | |||||||||
| A_12_P130111 | |||||||||
| A_12_P130112 | |||||||||
| A_12_P130113 | |||||||||
| A_12_P130114 | |||||||||
| A_12_P130115 | |||||||||
| Aff_ZK563.5 | |||||||||
| GPL13394_WBGene00022769 | |||||||||
| GPL13914_ZK563.5 | |||||||||
| GPL14144_ZK563.5_255-314_0.912_12_B | |||||||||
| GPL14144_ZK563.5_403-462_0.810_36_C | |||||||||
| GPL14144_ZK563.5_469-528_0.934_6_A | |||||||||
| GPL19516_CGZ0057061 | |||||||||
| GPL21109_ZK563.5 | |||||||||
| GPL3518_CE05096 | |||||||||
| GPL8304_CE_WBGene00022769_A | |||||||||
| GPL8673_ZK563_5P00092 | |||||||||
| GPL8673_ZK563_5P00150 | |||||||||
| GPL8673_ZK563_5P00373 | |||||||||
| GPL9450_ZK563.5 | |||||||||
| cea2.i.58656 | |||||||||
| Expression_cluster (101) | |||||||||
| Interaction | WBInteraction000304431 | ||||||||
| WBInteraction000347256 | |||||||||
| WBInteraction000407413 | |||||||||
| WBInteraction000424622 | |||||||||
| WBInteraction000450636 | |||||||||
| WBInteraction000542253 | |||||||||
| WBInteraction000542255 | |||||||||
| Map_info | Map | X | Position | -10.3949 | |||||
| Positive | Positive_clone | ZK563 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00049116 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
