WormBase Tree Display for Gene: WBGene00022749
expand all nodes | collapse all nodes | view schema
| WBGene00022749 | SMap | S_parent | Sequence | ZK484 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | ZK484.3 | |||||||
| Molecular_name | ZK484.3 | ||||||||
| ZK484.3.1 | |||||||||
| CE41970 | |||||||||
| Other_name | CELE_ZK484.3 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | ZK484.3 | ||||||||
| DB_info | Database | AceView | gene | 1G646 | |||||
| WormQTL | gene | WBGene00022749 | |||||||
| WormFlux | gene | WBGene00022749 | |||||||
| NDB | locus_tag | CELE_ZK484.3 | |||||||
| NCBI | gene | 266835 | |||||||
| RefSeq | protein | NM_059350.5 | |||||||
| TREEFAM | TREEFAM_ID | TF314696 | |||||||
| TrEMBL | UniProtAcc | O44895 | |||||||
| UniProt_GCRP | UniProtAcc | O44895 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:06 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (24) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP1296 | ||||||||
| Ortholog | WBGene00039279 | Caenorhabditis briggsae | From_analysis | Hillier-set | |||||
| OrthoMCL | |||||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00151789 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||||
| WBGene00194332 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||||
| WBGene00125557 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | ||||||
| WBGene00208799 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | ||||||
| WBGene00056311 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||||
| Cni-ZK484.3 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||||
| chrI_pilon.g1059 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00010708 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00021038 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalapaaaa; ABalappapa; ABarppaapp; germ line; and mechanosensory neurons based on proteomic; microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including hsf-1; let-7; and gld-1 based on microarray; proteomic; and RNA-seq studies. Is affected by six chemicals including paraquat; Capsaicin; and Hydrolyzable Tannins based on RNA-seq; proteomic; and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK484.3 | |||||||
| Corresponding_CDS_history | ZK484.3:wp185 | ||||||||
| Corresponding_transcript | ZK484.3.1 | ||||||||
| Other_sequence | CR12253 | ||||||||
| CRC04559_1 | |||||||||
| CBC15083_1 | |||||||||
| CJC16943_1 | |||||||||
| CR02385 | |||||||||
| Associated_feature | WBsf664319 | ||||||||
| WBsf664320 | |||||||||
| WBsf219535 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00038305 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00004937 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00059447 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00007623 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022551 | ||||||||
| Expr1040060 | |||||||||
| Expr1162873 | |||||||||
| Expr2008850 | |||||||||
| Expr2027084 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (104) | |||||||||
| Interaction (35) | |||||||||
| Map_info | Positive | Positive_clone | ZK484 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 0.747675 | |||||||
| Reference | WBPaper00064064 | ||||||||
| Method | Gene |
