WormBase Tree Display for Gene: WBGene00022731
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| WBGene00022731 | SMap | S_parent | Sequence | ZK402 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | ZK402.5 | |||||||
| Molecular_name | ZK402.5 | ||||||||
| ZK402.5.1 | |||||||||
| CE53536 | |||||||||
| Other_name | CELE_ZK402.5 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | ZK402.5 | ||||||||
| DB_info | Database (10) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:06 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar02121341 | ||||||||
| WBVar01703335 | |||||||||
| WBVar00074901 | |||||||||
| WBVar00074902 | |||||||||
| WBVar00074903 | |||||||||
| WBVar00074904 | |||||||||
| WBVar00074905 | |||||||||
| WBVar00074906 | |||||||||
| WBVar00074907 | |||||||||
| WBVar00074908 | |||||||||
| WBVar00074909 | |||||||||
| WBVar01690066 | |||||||||
| WBVar01690067 | |||||||||
| WBVar01824170 | |||||||||
| WBVar01824171 | |||||||||
| WBVar01824172 | |||||||||
| WBVar02151111 | |||||||||
| WBVar02076268 | |||||||||
| WBVar01119588 | |||||||||
| WBVar01119589 | |||||||||
| WBVar01119590 | |||||||||
| WBVar01119591 | |||||||||
| WBVar01757220 | |||||||||
| WBVar01119592 | |||||||||
| WBVar01467563 | |||||||||
| WBVar01119593 | |||||||||
| WBVar01467565 | |||||||||
| WBVar01119594 | |||||||||
| WBVar01119595 | |||||||||
| WBVar01499636 | |||||||||
| WBVar01600478 | |||||||||
| WBVar01600479 | |||||||||
| WBVar01987087 | |||||||||
| WBVar00494492 | |||||||||
| WBVar00494493 | |||||||||
| WBVar00494494 | |||||||||
| WBVar00494495 | |||||||||
| WBVar01618626 | |||||||||
| WBVar01618627 | |||||||||
| WBVar02151606 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00039293 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||
| WBGene00023828 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
| WBGene00069550 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||||
| WBGene00036139 | Caenorhabditis briggsae | From_analysis | Inparanoid_8 | ||||||
| WBGene00124063 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | ||||||
| WBGene00057293 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||||
| chrX_pilon.g18429 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| chrX_pilon.g18430 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| chrX_pilon.g18431 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog (37) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABplppppaa; ABprppppaa; germline precursor cell; neurons; and retrovesicular ganglion based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; glp-1; and let-60 based on RNA-seq and microarray studies. Is affected by twelve chemicals including stearic acid; sucrose; and Doxycycline based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: SPK domain and Domain of unknown function (DUF545). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK402.5 | |||||||
| Corresponding_CDS_history | ZK402.5:wp272 | ||||||||
| Corresponding_transcript | ZK402.5.1 | ||||||||
| Associated_feature | WBsf1004029 | ||||||||
| WBsf1022265 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00022001 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00012482 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021999 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00059411 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043308 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00082475 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021998 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00082672 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00059409 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1162840 | ||||||||
| Expr2008834 | |||||||||
| Expr2027068 | |||||||||
| Drives_construct | WBCnstr00024018 | ||||||||
| Construct_product | WBCnstr00024018 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (95) | |||||||||
| Interaction | WBInteraction000216581 | ||||||||
| WBInteraction000227158 | |||||||||
| Map_info | Positive | Positive_clone | ZK402 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -18.1707 | |||||||
| Method | Gene |
