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WormBase Tree Display for Gene: WBGene00022698

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Name Class

WBGene00022698SMapS_parentSequenceZK353
IdentityVersion1
NameSequence_nameZK353.2
Molecular_nameZK353.2
ZK353.2.1
CE00386
Other_nameCELE_ZK353.2Accession_evidenceNDBBX284603
Public_nameZK353.2
DB_infoDatabaseAceViewgene3J483
WormQTLgeneWBGene00022698
WormFluxgeneWBGene00022698
NDBlocus_tagCELE_ZK353.2
PanthergeneCAEEL|WormBase=WBGene00022698|UniProtKB=P34625
familyPTHR34149
NCBIgene191286
RefSeqproteinNM_066452.2
SwissProtUniProtAccP34625
TREEFAMTREEFAM_IDTF320905
UniProt_GCRPUniProtAccP34625
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:06WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar01500260
WBVar00403315
WBVar00844474
WBVar00844475
WBVar00844476
WBVar00844477
WBVar00844478
WBVar01499774
WBVar01838229
WBVar01838230
RNASeq_FPKM (74)
OrthologWBGene00062972Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00158963Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00218154Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00037620Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
CBOVI.g4380Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g8484Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g13443Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g11378Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g10534Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g4818Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g8685Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g360Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g2007Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g24929Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g20696Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-ZK353.2Caenorhabditis nigoniFrom_analysisWormBase-Compara
FL83_15092Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_010163Caenorhabditis remaneiFrom_analysisWormBase-Compara
Sp34_30081300Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIII_pilon.g8394Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00274987Pristionchus pacificusFrom_analysisWormBase-Compara
ParalogWBGene00007474Caenorhabditis elegansFrom_analysisPanther
WBGene00009915Caenorhabditis elegansFrom_analysisPanther
WBGene00010598Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00011220Caenorhabditis elegansFrom_analysisPanther
WBGene00012759Caenorhabditis elegansFrom_analysisPanther
WBGene00018348Caenorhabditis elegansFrom_analysisPanther
WBGene00194747Caenorhabditis elegansFrom_analysisPanther
WBGene00194733Caenorhabditis elegansFrom_analysisPanther
WBGene00044756Caenorhabditis elegansFrom_analysisPanther
Structured_descriptionAutomated_descriptionEnriched in several structures, including ABplppppaa; MSpppaaa; anterior arcade cell; head mesodermal cell; and rectal gland cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; elt-2; and aak-2 based on tiling array; microarray; and RNA-seq studies. Is affected by nine chemicals including multi-walled carbon nanotube; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein SUP-1-like and Protein of unknown function (DUF2650).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSZK353.2
Corresponding_transcriptZK353.2.1
Other_sequenceTcol_isotig10938
Dviv_isotig34668
Tcol_isotig10939
Associated_featureWBsf1015417
WBsf225406
WBsf225407
Experimental_infoRNAi_resultWBRNAi00038262Inferred_automaticallyRNAi_primary
WBRNAi00006825Inferred_automaticallyRNAi_primary
WBRNAi00021956Inferred_automaticallyRNAi_primary
WBRNAi00059350Inferred_automaticallyRNAi_primary
Expr_patternExpr1011657
Expr1040035
Expr1162778
Expr2008815
Expr2027049
Drives_constructWBCnstr00024043
Construct_productWBCnstr00024043
Microarray_results (19)
Expression_cluster (93)
Map_infoPositivePositive_cloneZK353Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIII-0.271181
MethodGene