WormBase Tree Display for Gene: WBGene00022680
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| WBGene00022680 | SMap | S_parent | Sequence | ZK180 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | ZK180.6 | |||||||
| Molecular_name | ZK180.6a | ||||||||
| ZK180.6a.1 | |||||||||
| CE40731 | |||||||||
| ZK180.6b | |||||||||
| CE48820 | |||||||||
| ZK180.6b.1 | |||||||||
| Other_name | CELE_ZK180.6 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | ZK180.6 | ||||||||
| DB_info | Database | AceView | gene | 4F284 | |||||
| WormQTL | gene | WBGene00022680 | |||||||
| WormFlux | gene | WBGene00022680 | |||||||
| NDB | locus_tag | CELE_ZK180.6 | |||||||
| NCBI | gene | 177219 | |||||||
| RefSeq | protein | NM_068183.5 | |||||||
| NM_001380197.1 | |||||||||
| TrEMBL | UniProtAcc | Q23447 | |||||||
| U4PMA2 | |||||||||
| UniProt_GCRP | UniProtAcc | Q23447 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:06 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (81) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (20) | |||||||||
| Structured_description | Automated_description | Enriched in cholinergic neurons; mechanosensory neurons; rectal epithelial cell; and rectal gland cell based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; proteomic; and RNA-seq studies. Is affected by twenty-three chemicals including hydrogen sulfide; Nitric Oxide; and methylmercury hydroxide based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK180.6a | |||||||
| ZK180.6b | |||||||||
| Corresponding_CDS_history | ZK180.6:wp171 | ||||||||
| Corresponding_transcript | ZK180.6a.1 | ||||||||
| ZK180.6b.1 | |||||||||
| Other_sequence | CJC01377_1 | ||||||||
| Associated_feature | WBsf651749 | ||||||||
| WBsf651750 | |||||||||
| WBsf996303 | |||||||||
| WBsf996304 | |||||||||
| WBsf996305 | |||||||||
| WBsf1017257 | |||||||||
| WBsf1017258 | |||||||||
| WBsf229983 | |||||||||
| WBsf229984 | |||||||||
| WBsf229985 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00021908 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00059268 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00038223 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1013028 | ||||||||
| Expr1040024 | |||||||||
| Expr1162694 | |||||||||
| Expr2008780 | |||||||||
| Expr2027015 | |||||||||
| Drives_construct | WBCnstr00024057 | ||||||||
| Construct_product | WBCnstr00024057 | ||||||||
| Microarray_results | SMD_ZK180.6 | ||||||||
| 180664_s_at | |||||||||
| A_12_P114291 | |||||||||
| Aff_ZK180.6 | |||||||||
| GPL13394_WBGene00022680 | |||||||||
| GPL13914_ZK180.6 | |||||||||
| GPL14144_ZK180.6_1763-1822_0.932_3_B | |||||||||
| GPL14144_ZK180.6_1821-1880_0.920_10_C | |||||||||
| GPL14144_ZK180.6_1908-1967_0.952_1_A | |||||||||
| GPL19516_CGZ0056500 | |||||||||
| GPL19516_CGZ0056501 | |||||||||
| GPL21109_ZK180.6a | |||||||||
| GPL3518_CE07624 | |||||||||
| GPL8304_CE_WBGene00022680_A | |||||||||
| GPL8673_ZK180_6P01059 | |||||||||
| GPL8673_ZK180_6P01660 | |||||||||
| GPL8673_ZK180_6P01917 | |||||||||
| GPL9450_ZK180.6 | |||||||||
| cea2.p.105706 | |||||||||
| Expression_cluster (282) | |||||||||
| Interaction (172) | |||||||||
| Map_info | Positive | Positive_clone | ZK180 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 0.4508 | |||||||
| Method | Gene |
