WormBase Tree Display for Gene: WBGene00022516
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| WBGene00022516 | SMap | S_parent | Sequence | ZC97 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | mtx-2 | Person_evidence | WBPerson4055 | |||||
| Sequence_name | ZC97.1 | ||||||||
| Molecular_name | ZC97.1a | ||||||||
| ZC97.1a.1 | |||||||||
| CE00360 | |||||||||
| ZC97.1b | |||||||||
| CE45721 | |||||||||
| ZC97.1a.2 | |||||||||
| ZC97.1b.1 | |||||||||
| Other_name | tag-354 | Person_evidence | WBPerson201 | ||||||
| CELE_ZC97.1 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | mtx-2 | ||||||||
| DB_info | Database | AceView | gene | 3I852 | |||||
| WormQTL | gene | WBGene00022516 | |||||||
| WormFlux | gene | WBGene00022516 | |||||||
| NDB | locus_tag | CELE_ZC97.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00022516|UniProtKB=P34599 | |||||||
| family | PTHR12289 | ||||||||
| NCBI | gene | 176087 | |||||||
| RefSeq | protein | NM_181943.7 | |||||||
| NM_066288.7 | |||||||||
| SwissProt | UniProtAcc | P34599 | |||||||
| TREEFAM | TREEFAM_ID | TF313422 | |||||||
| UniProt_GCRP | UniProtAcc | P34599 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 21 Jun 2005 09:45:25 | WBPerson2970 | Name_change | CGC_name | tag-354 | ||||
| 3 | 20 Jul 2007 11:50:19 | WBPerson2970 | Name_change | CGC_name | mtx-2 | ||||
| Other_name | tag-354 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mtx | ||||||||
| Allele (27) | |||||||||
| Strain | WBStrain00036293 | ||||||||
| WBStrain00055677 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00043368 | ||||||||
| 00043369 | |||||||||
| 00043370 | |||||||||
| 00043371 | |||||||||
| 00043372 | |||||||||
| 00043373 | |||||||||
| 00043374 | |||||||||
| 00043375 | |||||||||
| 00043376 | |||||||||
| 00126594 | |||||||||
| Contained_in_operon | CEOP3448 | ||||||||
| Ortholog (38) | |||||||||
| Paralog (12) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in mitochondrion organization. Located in mitochondrion. Is an ortholog of human MTX2 (metaxin 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZC97.1a | |||||||
| ZC97.1b | |||||||||
| Corresponding_CDS_history | ZC97.1a:wp223 | ||||||||
| ZC97.1b:wp223 | |||||||||
| Corresponding_transcript | ZC97.1a.1 | ||||||||
| ZC97.1a.2 | |||||||||
| ZC97.1b.1 | |||||||||
| Other_sequence (23) | |||||||||
| Associated_feature | WBsf667102 | ||||||||
| WBsf227019 | |||||||||
| WBsf227020 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00005534 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00059030 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00076865 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00038106 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021766 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr9538 | ||||||||
| Expr1025743 | |||||||||
| Expr1039952 | |||||||||
| Expr1162460 | |||||||||
| Expr2013821 | |||||||||
| Expr2032061 | |||||||||
| Drives_construct | WBCnstr00024187 | ||||||||
| Construct_product | WBCnstr00014103 | ||||||||
| WBCnstr00024187 | |||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (93) | |||||||||
| Interaction (43) | |||||||||
| Map_info | Map | III | Position | -0.60674 | Error | 0.002603 | |||
| Positive | Positive_clone | ZC97 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5266 | |||||||
| 4191 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038444 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00041771 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00060838 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
