WormBase Tree Display for Gene: WBGene00022505
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WBGene00022505 | SMap | S_parent | Sequence | ZC21 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||
Name | CGC_name | idpp-15 | Person_evidence | WBPerson1820 | |||
Sequence_name | ZC21.3 | ||||||
Molecular_name (15) | |||||||
Other_name | CELE_ZC21.3 | Accession_evidence | NDB | BX284603 | |||
Public_name | idpp-15 | ||||||
DB_info | Database | AceView | gene | 3J617 | |||
WormQTL | gene | WBGene00022505 | |||||
WormFlux | gene | WBGene00022505 | |||||
NDB | locus_tag | CELE_ZC21.3 | |||||
NCBI | gene | 191053 | |||||
RefSeq | protein | NM_001379833.1 | |||||
NM_001306746.3 | |||||||
NM_001306747.2 | |||||||
NM_001306745.3 | |||||||
NM_001379834.1 | |||||||
SwissProt | UniProtAcc | P34587 | |||||
TREEFAM | TREEFAM_ID | TF343101 | |||||
TrEMBL | UniProtAcc | U4PBK5 | |||||
G4RUC0 | |||||||
U4PBY4 | |||||||
U4PME0 | |||||||
UniProt_GCRP | UniProtAcc | P34587 | |||||
Species | Caenorhabditis elegans | ||||||
History (2) | |||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | idpp | ||||||
Allele (36) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (18) | |||||||
Structured_description | Concise_description | ZC21.3 encodes a protein predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). | Paper_evidence | WBPaper00005068 | |||
WBPaper00012788 | |||||||
WBPaper00012830 | |||||||
WBPaper00012882 | |||||||
WBPaper00012897 | |||||||
WBPaper00013003 | |||||||
Curator_confirmed | WBPerson567 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Enriched in several structures, including ABplppppaa; ABprppppaa; AUA; accessory cell; and head mesodermal cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on RNA-seq; tiling array; and microarray studies. Is affected by nineteen chemicals including Ethanol; 1-methylnicotinamide; and nicotinic acid based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info (5) | |||||||
Experimental_info | RNAi_result | WBRNAi00058795 | Inferred_automatically | RNAi_primary | |||
WBRNAi00021619 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00005225 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00037987 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr67 | ||||||
Expr1026616 | |||||||
Expr1028105 | |||||||
Expr1039948 | |||||||
Expr1040236 | |||||||
Expr1162218 | |||||||
Expr1162221 | |||||||
Expr2008576 | |||||||
Expr2026815 | |||||||
Drives_construct | WBCnstr00023615 | ||||||
WBCnstr00024195 | |||||||
Construct_product | WBCnstr00023615 | ||||||
WBCnstr00024195 | |||||||
Microarray_results (38) | |||||||
Expression_cluster (215) | |||||||
Map_info | Map | III | Position | -0.2542 | |||
Positive | Positive_clone | ZC21 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00064648 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |