WormBase Tree Display for Gene: WBGene00022496
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WBGene00022496 | SMap | S_parent | Sequence | Y119D3B | |||
---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||
Name | CGC_name | fbxa-92 | Person_evidence | WBPerson655 | |||
Sequence_name | Y119D3B.20 | ||||||
Molecular_name | Y119D3B.20 | ||||||
Other_name | CELE_Y119D3B.20 | Accession_evidence | NDB | BX284603 | |||
Public_name | fbxa-92 | ||||||
DB_info | Database | AceView | gene | 3C348 | |||
WormQTL | gene | WBGene00022496 | |||||
WormFlux | gene | WBGene00022496 | |||||
NDB | locus_tag | CELE_Y119D3B.20 | |||||
NCBI | gene | 191047 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (3) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0000336 | |||||
Gene_class | fbxa | ||||||
Allele (35) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog | WBGene00080372 | Caenorhabditis remanei | From_analysis | TreeFam | |||
Paralog (216) | |||||||
Structured_description | Concise_description | fbxa-92 encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; FBXA-92 also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. | Paper_evidence | WBPaper00012854 | |||
Curator_confirmed | WBPerson567 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Enriched in MSpaaaaa and intestine based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; skn-1; and dpy-10 based on microarray and RNA-seq studies. Is affected by twelve chemicals including D-glucopyranose; Psoralens; and allantoin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info (3) | |||||||
Experimental_info | Expr_pattern | Expr1159019 | |||||
Expr2011588 | |||||||
Expr2029827 | |||||||
Drives_construct | WBCnstr00024203 | ||||||
Construct_product | WBCnstr00024203 | ||||||
Microarray_results | 176135_s_at | ||||||
A_12_P101767 | |||||||
GPL3518_CE26483 | |||||||
Expression_cluster (74) | |||||||
Interaction | WBInteraction000504154 | ||||||
Map_info | Map | III | Position | -22.5743 | |||
Positive | Positive_clone | Y119D3B | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |