WormBase Tree Display for Gene: WBGene00022496
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WBGene00022496 | SMap | S_parent | Sequence | Y119D3B | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0000336 | ||||
Gene_class | fbxa | |||||
Allele (35) | ||||||
RNASeq_FPKM (74) | ||||||
Ortholog | WBGene00080372 | Caenorhabditis remanei | From_analysis | TreeFam | ||
Paralog (216) | ||||||
Structured_description | Concise_description | fbxa-92 encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; FBXA-92 also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. | Paper_evidence | WBPaper00012854 | ||
Curator_confirmed | WBPerson567 | |||||
Date_last_updated | 17 Jun 2004 00:00:00 | |||||
Automated_description | Enriched in MSpaaaaa and intestine based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; skn-1; and dpy-10 based on microarray and RNA-seq studies. Is affected by twelve chemicals including D-glucopyranose; Psoralens; and allantoin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS_history | Y119D3B.20:wp275 | ||||
Corresponding_pseudogene | Y119D3B.20 | |||||
Associated_feature | WBsf991263 | |||||
WBsf1014207 | ||||||
Experimental_info | Expr_pattern | Expr1159019 | ||||
Expr2011588 | ||||||
Expr2029827 | ||||||
Drives_construct | WBCnstr00024203 | |||||
Construct_product | WBCnstr00024203 | |||||
Microarray_results | 176135_s_at | |||||
A_12_P101767 | ||||||
GPL3518_CE26483 | ||||||
Expression_cluster (74) | ||||||
Interaction | WBInteraction000504154 | |||||
Map_info | Map | III | Position | -22.5743 | ||
Positive | Positive_clone | Y119D3B | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Pseudo_map_position | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |