WormBase Tree Display for Gene: WBGene00022486
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| WBGene00022486 | SMap | S_parent | Sequence | Y119D3B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxa-61 | Person_evidence | WBPerson655 | |||||
| Sequence_name | Y119D3B.8 | ||||||||
| Molecular_name | Y119D3B.8 | ||||||||
| Y119D3B.8.1 | |||||||||
| CE39433 | |||||||||
| Y119D3B.8.2 | |||||||||
| Other_name | CELE_Y119D3B.8 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | fbxa-61 | ||||||||
| DB_info | Database | AceView | gene | 3C329 | |||||
| WormQTL | gene | WBGene00022486 | |||||||
| WormFlux | gene | WBGene00022486 | |||||||
| NDB | locus_tag | CELE_Y119D3B.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00022486|UniProtKB=Q8IAB2 | |||||||
| family | PTHR23015 | ||||||||
| NCBI | gene | 191041 | |||||||
| RefSeq | protein | NM_064952.7 | |||||||
| TREEFAM | TREEFAM_ID | TF322360 | |||||||
| TrEMBL | UniProtAcc | Q8IAB2 | |||||||
| UniProt_GCRP | UniProtAcc | Q8IAB2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Dec 2005 15:18:56 | WBPerson2970 | Name_change | CGC_name | fbxa-61 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxa | ||||||||
| Allele (146) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (15) | |||||||||
| Paralog (217) | |||||||||
| Structured_description | Automated_description | Enriched in OLL; PVD; head mesodermal cell; and intestine based on tiling array and RNA-seq studies. Is affected by several genes including daf-2; hsf-1; and eat-2 based on microarray and RNA-seq studies. Is affected by six chemicals including methylmercuric chloride; stavudine; and metformin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box-like domain superfamily; FTH domain; F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; and F-box A protein FB224. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y119D3B.8 | |||||||
| Corresponding_CDS_history | Y119D3B.8:wp90 | ||||||||
| Y119D3B.8:wp151 | |||||||||
| Corresponding_transcript | Y119D3B.8.1 | ||||||||
| Y119D3B.8.2 | |||||||||
| Associated_feature | WBsf644947 | ||||||||
| WBsf991256 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00055528 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1021421 | ||||||||
| Expr1159027 | |||||||||
| Expr2011562 | |||||||||
| Expr2029800 | |||||||||
| Drives_construct | WBCnstr00024207 | ||||||||
| Construct_product | WBCnstr00024207 | ||||||||
| Microarray_results (11) | |||||||||
| Expression_cluster (106) | |||||||||
| Map_info | Map | III | Position | -22.5868 | Error | 0.001736 | |||
| Positive | Positive_clone | Y119D3B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
