WormBase Tree Display for Gene: WBGene00022474
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WBGene00022474 | SMap | S_parent | Sequence | Y119C1B | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | zig-9 | Person_evidence | WBPerson260 | |||||
Sequence_name | Y119C1B.9 | ||||||||
Molecular_name | Y119C1B.9 | ||||||||
Y119C1B.9.1 | |||||||||
CE44070 | |||||||||
Other_name | Y119C1B.c | Curator_confirmed | WBPerson1983 | ||||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
CELE_Y119C1B.9 | Accession_evidence | NDB | BX284601 | ||||||
Public_name | zig-9 | ||||||||
DB_info | Database | AceView | gene | 1F104 | |||||
WormQTL | gene | WBGene00022474 | |||||||
WormFlux | gene | WBGene00022474 | |||||||
NDB | locus_tag | CELE_Y119C1B.9 | |||||||
NCBI | gene | 191030 | |||||||
RefSeq | protein | NM_058984.4 | |||||||
TrEMBL | UniProtAcc | Q95Y79 | |||||||
UniProt_GCRP | UniProtAcc | Q95Y79 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 24 Feb 2012 15:34:46 | WBPerson2970 | Name_change | CGC_name | zig-9 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | zig | ||||||||
Allele (36) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (24) | |||||||||
Structured_description | Automated_description | Enriched in SMB; head mesodermal cell; intestine; and spermatheca based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on tiling array; proteomic; RNA-seq; and microarray studies. Is affected by nine chemicals including diallyl trisulfide; mianserin; and Psoralens based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Immunoglobulin-like fold and Immunoglobulin-like domain superfamily. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y119C1B.9 | |||||||
Corresponding_CDS_history | Y119C1B.9:wp155 | ||||||||
Y119C1B.9:wp205 | |||||||||
Corresponding_transcript | Y119C1B.9.1 | ||||||||
Associated_feature (20) | |||||||||
Experimental_info | RNAi_result | WBRNAi00055500 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1012911 | ||||||||
Expr1159005 | |||||||||
Expr2018148 | |||||||||
Expr2036285 | |||||||||
Drives_construct | WBCnstr00024217 | ||||||||
Construct_product | WBCnstr00024217 | ||||||||
Microarray_results (16) | |||||||||
Expression_cluster (166) | |||||||||
Interaction | WBInteraction000552318 | ||||||||
WBInteraction000552790 | |||||||||
WBInteraction000564452 | |||||||||
Map_info | Map | I | Position | -1.05785 | |||||
Positive | Positive_clone | Y119C1B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00061547 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |