WormBase Tree Display for Gene: WBGene00022444

WBGene00022444 SMap: S_parent: Sequence: Y110A2AL
  Identity: Version: 1
    Name: Sequence_name: Y110A2AL.7
      Molecular_name: Y110A2AL.7
        Y110A2AL.7.1
        CE23221
      Other_name: CELE_Y110A2AL.7 Accession_evidence: NDB BX284602
      Public_name: Y110A2AL.7
    DB_info: Database: AceView gene 2D134
        WormQTL gene WBGene00022444
        WormFlux gene WBGene00022444
        NDB locus_tag CELE_Y110A2AL.7
        NCBI gene 190938
        RefSeq protein NM_061981.4
        TREEFAM TREEFAM_ID TF322344
        TrEMBL UniProtAcc Q9N4A2
        UniProt_GCRP UniProtAcc Q9N4A2
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:05 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (19)
    RNASeq_FPKM (74)
    Ortholog (13)
    Paralog: WBGene00022441 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00022443 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
    Structured_description: Automated_description: Enriched in XXXL; XXXR; germ line; male-specific anatomical entity; and in male based on proteomic; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; rrf-3; and eat-2 based on tiling array; RNA-seq; and microarray studies. Is affected by six chemicals including allantoin; Sirolimus; and metformin based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y110A2AL.7
    Corresponding_transcript: Y110A2AL.7.1
    Associated_feature: WBsf987075
      WBsf1011781
      WBsf222807
  Experimental_info: RNAi_result: WBRNAi00112602 Inferred_automatically: RNAi_primary
      WBRNAi00036543 Inferred_automatically: RNAi_primary
      WBRNAi00112603 Inferred_automatically: RNAi_primary
      WBRNAi00055304 Inferred_automatically: RNAi_primary
      WBRNAi00019863 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1012923
      Expr1158841
      Expr2007010
      Expr2025235
    Drives_construct: WBCnstr00024230
      WBCnstr00041166
    Construct_product: WBCnstr00024230
    Microarray_results (14)
    Expression_cluster: WBPaper00028451:Abundant_spermatogenesis_enriched
      WBPaper00033070:Elbe_downregulated
      WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:coelomocytes_L1-larva_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00042477:rsr-2(RNAi)_upregulated_TilingArray
      WBPaper00044736:rising_dev_expression
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00046497:B.thuringiensis_0.1mix_upregulated_6h
      WBPaper00050231:male_enriched
      WBPaper00052884:emb-4(hc60)_downregulated
      WBPaper00053184:sma-2(rax5)_downregulated
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053599:female_vs_male_downregulated
      WBPaper00053909:N2_vs_CB4856_downregulated
      WBPaper00055226:adr-1(tm668)_upregulated
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Rapamycin-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Metformin_upregulated
      WBPaper00055354:Rapamycin-Psora-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Psora_upregulated
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00055386:eat-2(ad465)_downregulated
      WBPaper00055648:male-seminal-vesicle_expressed
      WBPaper00055971:nhl-2(ok818)_20C_downregulated
      WBPaper00055971:nhl-2(ok818)_25C_downregulated
      WBPaper00056169:rrf-3(pk1426)_upregulated_adult
      WBPaper00056169:rrf-3(pk1426)_upregulated_L4
      WBPaper00056218:daf-16(mu86)_downregulated_Day7
      WBPaper00056471:flcn-1(ok975)_downregulated
      WBPaper00059426:SiO2-nanoparticles_downregulated
      WBPaper00059739:hira-1(gk835598)_downregulated_adult
      WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
      WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
      WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
      WBPaper00060871:M.humicola-infection_48h_regulated
      WBPaper00060921:tbh-1(ok1196)_downregulated
      WBPaper00060921:tph-1(mg280)_downregulated
      WBPaper00061285:wounding_0h_upregulated
      WBPaper00061340:XXX
      WBPaper00061527:clec-94-Y110A2AL.7
      WBPaper00061753:csr-1(tor159)_downregulated_20C
      WBPaper00061753:csr-1(tor159)_downregulated_25C
      WBPaper00062446:nhr-8(hd117)_downregulated
      WBPaper00062669:extracellular-vesicle_protein
      WBPaper00064502:spe-44(fx110)_downregulated
      WBPaper00064728:cpl-1(W32AY35A)_upregulated
      WBPaper00065225:nhr-42(tm1375)_upregulated_S.aureus-infected
      WBPaper00065225:nhr-42(tm1375)_upregulated_uninfected
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      WBPaper00066204:CdCl2_downregulated_mRNA
      cgc4489_group_14
      WBPaper00026629:L4_male_enriched
      WBPaper00031252:AIN-1_IP_enriched
      WBPaper00036130:mir-243_up_regulated
      WBPaper00036375:depleted_in_PVD_OLL
      WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
      WBPaper00040858:eQTL_age_regulated_developing
      WBPaper00040858:eQTL_regulated_developing
      WBPaper00040858:eQTL_regulated_reproductive
      WBPaper00044535:male_upregulated
      WBPaper00045865:biofilm_downregulated_A
      WBPaper00048989:N2_rapamycin_upregulated
      [cgc6390]:male_soma-enriched
  Map_info: Positive: Positive_clone: Y110A2AL Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II -9.93181
  Method: Gene