WormBase Tree Display for Gene: WBGene00022396
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| WBGene00022396 | SMap | S_parent | Sequence | Y97E10AR | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y97E10AR.1 | |||||||
| Molecular_name | Y97E10AR.1 | ||||||||
| Y97E10AR.1.1 | |||||||||
| CE33347 | |||||||||
| Other_name | Y97E10AR.f | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y97E10AR.1 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | Y97E10AR.1 | ||||||||
| DB_info | Database | AceView | gene | 5I483 | |||||
| WormQTL | gene | WBGene00022396 | |||||||
| WormFlux | gene | WBGene00022396 | |||||||
| NDB | locus_tag | CELE_Y97E10AR.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00022396|UniProtKB=Q9N2U9 | |||||||
| family | PTHR47022 | ||||||||
| NCBI | gene | 179174 | |||||||
| RefSeq | protein | NM_072657.6 | |||||||
| TREEFAM | TREEFAM_ID | TF318535 | |||||||
| TrEMBL | UniProtAcc | Q9N2U9 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N2U9 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (42) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00103976 | Pristionchus pacificus | From_analysis | Inparanoid_8 | |||||
| WBGene00032518 | Caenorhabditis briggsae | From_analysis | Hillier-set | ||||||
| OrthoMCL | |||||||||
| OMA | |||||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00052957 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| TreeFam | |||||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00160970 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
| TreeFam | |||||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00139120 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
| TreeFam | |||||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00126676 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | ||||||
| WormBase-Compara | |||||||||
| CSP26.g8646 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | ||||||
| CSP28.g4334 | Caenorhabditis panamensis | From_analysis | WormBase-Compara | ||||||
| CSP29.g9385 | Caenorhabditis becei | From_analysis | WormBase-Compara | ||||||
| CSP32.g6822 | Caenorhabditis sulstoni | From_analysis | WormBase-Compara | ||||||
| CSP39.g9793 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||||
| CSP40.g7587 | Caenorhabditis tribulationis | From_analysis | WormBase-Compara | ||||||
| Cnig_chr_V.g16448 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||||
| Cnig_chr_V.g16471 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||||
| Csp11.Scaffold481.g1849 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||||
| Csp5_scaffold_00649.g14010 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
| FL83_03679 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
| GCK72_018724 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
| Sp34_50098700 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||||
| chrV_pilon.g14873 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog (77) | |||||||||
| Structured_description | Automated_description | Enriched in g1; head mesodermal cell; intestine; and neurons based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; daf-12; and hsf-1 based on microarray; RNA-seq; and tiling array studies. Is affected by twenty-one chemicals including 1-methylnicotinamide; methylmercuric chloride; and sesamin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: SKP1/BTB/POZ domain superfamily and BTB/POZ domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y97E10AR.1 | |||||||
| Corresponding_CDS_history | Y97E10AR.1:wp93 | ||||||||
| Corresponding_transcript | Y97E10AR.1.1 | ||||||||
| Other_sequence | CR10768 | ||||||||
| CJC07134_1 | |||||||||
| CR05723 | |||||||||
| CRC03550_1 | |||||||||
| CRC05035_1 | |||||||||
| Associated_feature | WBsf646976 | ||||||||
| WBsf646977 | |||||||||
| WBsf655103 | |||||||||
| WBsf1000560 | |||||||||
| WBsf1000561 | |||||||||
| WBsf1019972 | |||||||||
| WBsf1019973 | |||||||||
| WBsf232043 | |||||||||
| WBsf232044 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00021538 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00058678 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028192 | ||||||||
| Expr1039888 | |||||||||
| Expr1162098 | |||||||||
| Expr2008524 | |||||||||
| Expr2026762 | |||||||||
| Drives_construct | WBCnstr00024257 | ||||||||
| Construct_product | WBCnstr00024257 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (194) | |||||||||
| Map_info | Positive | Positive_clone | Y97E10AR | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 1.00052 | |||||||
| Method | Gene |
