WormBase Tree Display for Gene: WBGene00022232
expand all nodes | collapse all nodes | view schema
| WBGene00022232 | SMap | S_parent | Sequence | Y73B6BL | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | exos-2 | Person_evidence | WBPerson699 | |||||
| WBPerson6229 | |||||||||
| Sequence_name | Y73B6BL.3 | ||||||||
| Molecular_name | Y73B6BL.3 | ||||||||
| Y73B6BL.3.1 | |||||||||
| CE27533 | |||||||||
| Other_name | CELE_Y73B6BL.3 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | exos-2 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 04 Jun 2007 15:54:19 | WBPerson2970 | Name_change | CGC_name | exos-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | exos | ||||||||
| Allele (23) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (23) | |||||||||
| Ortholog (35) | |||||||||
| Paralog | WBGene00010325 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable RNA binding activity. Predicted to be involved in RNA metabolic process. Located in cytoplasm and nucleus. Human ortholog(s) of this gene implicated in short stature, hearing loss, retinitis pigmentosa, and distinctive facies. Is an ortholog of human EXOSC2 (exosome component 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0081175 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:17097) | ||||
| Molecular_info | Corresponding_CDS | Y73B6BL.3 | |||||||
| Corresponding_transcript | Y73B6BL.3.1 | ||||||||
| Other_sequence (17) | |||||||||
| Associated_feature | WBsf228407 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00058323 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00058331 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00058321 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr16395 | ||||||||
| Expr1028126 | |||||||||
| Expr1039802 | |||||||||
| Expr1161741 | |||||||||
| Expr2011401 | |||||||||
| Expr2029637 | |||||||||
| Drives_construct | WBCnstr00024327 | ||||||||
| WBCnstr00042996 | |||||||||
| Construct_product | WBCnstr00024327 | ||||||||
| WBCnstr00042996 | |||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (114) | |||||||||
| Interaction (61) | |||||||||
| Map_info | Map | IV | Position | 3.19783 | Error | 0.000142 | |||
| Positive | Positive_clone | Y73B6BL | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00032091 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064666 | |||||||||
| WBPaper00065012 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
