WormBase Tree Display for Gene: WBGene00022213

WBGene00022213 SMap: S_parent: Sequence: Y73B3A
  Identity: Version: 1
    Name: Sequence_name: Y73B3A.11
      Molecular_name: Y73B3A.11
        Y73B3A.11.1
        CE53598
      Other_name: CELE_Y73B3A.11 Accession_evidence: NDB BX284606
      Public_name: Y73B3A.11
    DB_info: Database: AceView gene XA787
        WormQTL gene WBGene00022213
        WormFlux gene WBGene00022213
        NDB locus_tag CELE_Y73B3A.11
        NCBI gene 190629
        RefSeq protein NM_001374932.2
        TrEMBL UniProtAcc Q95XF8
        UniProt_GCRP UniProtAcc Q95XF8
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:05 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (26)
    RNASeq_FPKM (74)
    Ortholog: chrX_pilon.g18222 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in neurons based on RNA-seq studies. Is affected by several genes including daf-16; daf-2; and eat-2 based on microarray; tiling array; and RNA-seq studies. Is affected by silicon dioxide nanoparticle based on RNA-seq studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y73B3A.11
    Corresponding_CDS_history: Y73B3A.11:wp272
    Corresponding_transcript: Y73B3A.11.1
  Experimental_info: RNAi_result: WBRNAi00055472 Inferred_automatically: RNAi_primary
      WBRNAi00058283 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1022405
      Expr1161693
      Expr2008339
      Expr2026580
    Microarray_results (14)
    Expression_cluster: WBPaper00031040:TGF-beta_adult_downregulated
      WBPaper00033065:clk-1(qm30)_upregulated
      WBPaper00038438:D.coniospora_12hr_upregulated_RNAseq
      WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
      WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
      WBPaper00040560:hpl-2_L3_upregulated
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00045774:clk-1_upregulated
      WBPaper00045861:set-2(ok952)_upregulated
      WBPaper00045861:wdr-5(ok1417)_upregulated
      WBPaper00048971:daf-16(mgDf50)_downregulated_L1
      WBPaper00048988:neuron_expressed
      WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
      WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
      WBPaper00050488:20C_vs_25C_regulated_N2_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:daf-2(e1370)_vs_daf-2(e1370);mir-34(gk437)_regulated_dauer_25C
      WBPaper00050488:N2_vs_mir-34(gk437)_regulated_adult_25C
      WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_adult_25C
      WBPaper00053888:drh-3(rrr2)_upregulated
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055386:daf-2(e1370)_downregulated
      WBPaper00056284:ints-4(RNAi)_upregulated
      WBPaper00057140:meg-3(tm4259)_meg-4(ax2026)_upregulated
      WBPaper00057140:pptr-1(tm3103)_upregulated
      WBPaper00058955:heatshock_upregulated_CE
      WBPaper00060014:set-2(tm1630)_upregulated
      WBPaper00060014:set-2(zr2012)_downregulated
      WBPaper00060434:pH4.33_vs_pH6.33_downrgulated
      WBPaper00061479:hda-1(ne4752)_upregulated
      WBPaper00061479:hrde-1(tm1200)_upregulated
      WBPaper00061479:ubc-9(ne4833)_upregulated
      WBPaper00061527:fbxa-154_11499-Y44A6D.1
      WBPaper00062103:neuron_enriched
      WBPaper00062446:nhr-8(hd117)_downregulated
      WBPaper00065288:mdt-15(tm2182)_upregulated
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00029437:rde-4_upregulated
      WBPaper00031252:AIN-1_IP_enriched
      WBPaper00035227:heat_shock_regulated
      WBPaper00036286:Pattern_B
      WBPaper00036286:Pattern_H
      WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
      WBPaper00040858:eQTL_regulated_juvenile
      WBPaper00041609:hpl-1_hpl-2_upregulated
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
      WBPaper00045263:isp-1(qm150)_upregulated
      WBPaper00045263:nuo-6(qm200)_upregulated
      WBPaper00056330:mrps-5(RNAi)_downregulated
      WBPaper00057098:SiO2-nanoparticles_upregulated
  Map_info: Positive: Positive_clone: Y73B3A Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: X -20.79
  Method: Gene