WormBase Tree Display for Gene: WBGene00022180
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| WBGene00022180 | SMap | S_parent | Sequence | Y71H2AM | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | gldi-9 | Person_evidence | WBPerson6609 | |||||
| WBPerson1816 | |||||||||
| Sequence_name | Y71H2AM.15 | ||||||||
| Molecular_name (12) | |||||||||
| Other_name | CELE_Y71H2AM.15 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | gldi-9 | ||||||||
| DB_info | Database | AceView | gene | 3D838 | |||||
| WormQTL | gene | WBGene00022180 | |||||||
| WormFlux | gene | WBGene00022180 | |||||||
| NDB | locus_tag | CELE_Y71H2AM.15 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00022180|UniProtKB=H2L0S5 | |||||||
| family | PTHR22741 | ||||||||
| NCBI | gene | 175391 | |||||||
| RefSeq | protein | NM_001038292.5 | |||||||
| NM_001421353.1 | |||||||||
| NM_001038293.5 | |||||||||
| NM_001421354.1 | |||||||||
| TREEFAM | TREEFAM_ID | TF317811 | |||||||
| TrEMBL | UniProtAcc | Q3V5J3 | |||||||
| H2L0S5 | |||||||||
| UniProt_GCRP | UniProtAcc | H2L0S5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 05 May 2023 12:43:53 | WBPerson51134 | Name_change | CGC_name | gldi-9 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gldi | ||||||||
| Allele (279) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00023315 | ||||||||
| 00023316 | |||||||||
| 00023317 | |||||||||
| Ortholog (34) | |||||||||
| Structured_description | Automated_description | Located in cell junction and striated muscle dense body. Is an ortholog of human KIAA1217 (KIAA1217) and SRCIN1 (SRC kinase signaling inhibitor 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y71H2AM.15a | |||||||
| Y71H2AM.15b | |||||||||
| Y71H2AM.15c | |||||||||
| Y71H2AM.15d | |||||||||
| Corresponding_CDS_history | Y71H2AM.15:wp147 | ||||||||
| Y71H2AM.15a:wp227 | |||||||||
| Corresponding_transcript | Y71H2AM.15a.1 | ||||||||
| Y71H2AM.15b.1 | |||||||||
| Y71H2AM.15c.1 | |||||||||
| Y71H2AM.15d.1 | |||||||||
| Other_sequence (17) | |||||||||
| Associated_feature | WBsf650886 | ||||||||
| WBsf666603 | |||||||||
| WBsf991596 | |||||||||
| WBsf991597 | |||||||||
| WBsf991598 | |||||||||
| WBsf1014454 | |||||||||
| WBsf1014455 | |||||||||
| WBsf226300 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00058237 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00021377 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00078606 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00078530 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00109654 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00109748 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00109701 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00109795 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr9372 | ||||||||
| Expr1010395 | |||||||||
| Expr1039779 | |||||||||
| Expr1161656 | |||||||||
| Expr2008320 | |||||||||
| Expr2026560 | |||||||||
| Construct_product | WBCnstr00013937 | ||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (201) | |||||||||
| Interaction (17) | |||||||||
| Map_info | Map | III | Position | -10.7271 | |||||
| Positive | Positive_clone | Y71H2AM | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00035598 | ||||||||
| WBPaper00038444 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
