WormBase Tree Display for Gene: WBGene00022113
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| WBGene00022113 | SMap | S_parent | Sequence | Y71F9AL | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y71F9AL.8 | |||||||
| Molecular_name | Y71F9AL.8 | ||||||||
| Y71F9AL.8.1 | |||||||||
| CE25560 | |||||||||
| Other_name | CELE_Y71F9AL.8 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | Y71F9AL.8 | ||||||||
| DB_info | Database | AceView | gene | 1D447 | |||||
| WormQTL | gene | WBGene00022113 | |||||||
| WormFlux | gene | WBGene00022113 | |||||||
| NDB | locus_tag | CELE_Y71F9AL.8 | |||||||
| NCBI | gene | 171855 | |||||||
| RefSeq | protein | NM_058663.4 | |||||||
| TrEMBL | UniProtAcc | Q9N4I2 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N4I2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (49) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP1068 | ||||||||
| Ortholog (15) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including NSM; cephalic sheath cell; g1; germ line; and germline precursor cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by eleven chemicals including stavudine; Zidovudine; and metformin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y71F9AL.8 | |||||||
| Corresponding_transcript | Y71F9AL.8.1 | ||||||||
| Associated_feature | WBsf643115 | ||||||||
| WBsf217346 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00058164 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00037774 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00001050 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004800 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00061947 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1012244 | ||||||||
| Expr1039728 | |||||||||
| Expr1161582 | |||||||||
| Expr2008284 | |||||||||
| Expr2026524 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (110) | |||||||||
| SAGE_tag | SAGE:atcaacaatg | Strand | Antisense | ||||||
| SAGE:cgaaggtggt | Strand | Antisense | |||||||
| SAGE:atcaacaatgaacaata | Strand | Antisense | |||||||
| SAGE:caatatttcc | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:ctcgcccctc | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:ctcgcccctccaatgtt | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| Map_info | Positive | Positive_clone | Y71F9AL | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | -5.30761 | |||||||
| Method | Gene |
