WormBase Tree Display for Gene: WBGene00022029
expand all nodes | collapse all nodes | view schema
| WBGene00022029 | SMap | S_parent | Sequence | Y65B4A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | eif-4A3 | Person_evidence | WBPerson6609 | |||||
| WBPerson1816 | |||||||||
| Sequence_name | Y65B4A.6 | ||||||||
| Molecular_name | Y65B4A.6a | ||||||||
| Y65B4A.6a.1 | |||||||||
| CE34419 | |||||||||
| Y65B4A.6b | |||||||||
| CE49411 | |||||||||
| Y65B4A.6b.1 | |||||||||
| Other_name | Y65B4A.e | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y65B4A.6 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | eif-4A3 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 05 May 2023 12:43:53 | WBPerson51134 | Name_change | CGC_name | eif-4A3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | eif | ||||||||
| Allele (130) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (14) | |||||||||
| Contained_in_operon | CEOP1012 | ||||||||
| Ortholog (51) | |||||||||
| Paralog (37) | |||||||||
| Structured_description | Automated_description | Predicted to enable RNA helicase activity and mRNA binding activity. Predicted to be involved in translational initiation. Predicted to be located in nucleolus. Predicted to be part of catalytic step 2 spliceosome. Human ortholog(s) of this gene implicated in intellectual disability and pancreatic cancer. Is an ortholog of human EIF4A3 (eukaryotic translation initiation factor 4A3). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:1793 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:18683) | ||||
| DOID:1059 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:18683) | ||||||
| Molecular_info | Corresponding_CDS | Y65B4A.6a | |||||||
| Y65B4A.6b | |||||||||
| Corresponding_CDS_history | Y65B4A.6:wp102 | ||||||||
| Corresponding_transcript | Y65B4A.6a.1 | ||||||||
| Y65B4A.6b.1 | |||||||||
| Other_sequence (73) | |||||||||
| Associated_feature | WBsf982550 | ||||||||
| WBsf1009108 | |||||||||
| WBsf1009109 | |||||||||
| Experimental_info | RNAi_result (19) | ||||||||
| Expr_pattern | Expr1024753 | ||||||||
| Expr1039683 | |||||||||
| Expr1161334 | |||||||||
| Expr2008161 | |||||||||
| Expr2026401 | |||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (90) | |||||||||
| Interaction (88) | |||||||||
| Map_info | Map | I | Position | -18.6805 | |||||
| Positive | Positive_clone | Y65B4A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027281 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00041771 | |||||||||
| WBPaper00046427 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064339 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
