WormBase Tree Display for Gene: WBGene00022022
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| WBGene00022022 | SMap | S_parent | Sequence | Y61A9LA | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | txt-6 | Person_evidence | WBPerson19237 | |||||
| Sequence_name | Y61A9LA.11 | ||||||||
| Molecular_name | Y61A9LA.11a | ||||||||
| Y61A9LA.11a.1 | |||||||||
| CE42439 | |||||||||
| Y61A9LA.11b | |||||||||
| CE42268 | |||||||||
| Y61A9LA.11b.1 | |||||||||
| Other_name | CELE_Y61A9LA.11 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | txt-6 | ||||||||
| DB_info | Database | AceView | gene | 5F84 | |||||
| WormQTL | gene | WBGene00022022 | |||||||
| WormFlux | gene | WBGene00022022 | |||||||
| NDB | locus_tag | CELE_Y61A9LA.11 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00022022|UniProtKB=B1GRJ8 | |||||||
| family | PTHR38636 | ||||||||
| NCBI | gene | 178850 | |||||||
| RefSeq | protein | NM_001129587.3 | |||||||
| NM_001129588.4 | |||||||||
| TrEMBL | UniProtAcc | H2L073 | |||||||
| B1GRJ8 | |||||||||
| UniProt_GCRP | UniProtAcc | B1GRJ8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 28 Jan 2020 11:43:42 | WBPerson1983 | Name_change | CGC_name | txt-6 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | txt | ||||||||
| Allele (55) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP5536 | ||||||||
| Ortholog (24) | |||||||||
| Paralog | WBGene00017887 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00017889 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Enriched in AFD; germ line; hypodermis; and intestine based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-2; pgl-1; and isp-1 based on microarray and RNA-seq studies. Is affected by eight chemicals including rotenone; bisphenol S; and Rifampin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function (DUF1757) and Protein of unknown function DUF1757. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y61A9LA.11a | |||||||
| Y61A9LA.11b | |||||||||
| Corresponding_CDS_history | Y61A9LA.11:wp188 | ||||||||
| Corresponding_transcript | Y61A9LA.11a.1 | ||||||||
| Y61A9LA.11b.1 | |||||||||
| Other_sequence (19) | |||||||||
| Associated_feature | WBsf1019522 | ||||||||
| WBsf233593 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00021210 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00057828 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00116220 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00116202 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025003 | ||||||||
| Expr1039677 | |||||||||
| Expr1161263 | |||||||||
| Expr2008125 | |||||||||
| Expr2026364 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (77) | |||||||||
| Interaction | WBInteraction000585651 | ||||||||
| Map_info | Positive | Positive_clone | Y61A9LA | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -4.94675 | |||||||
| Method | Gene |
